SCOPe 2.05: Domain d4ny8a1: 4ny8 A:11-91

Lineage for d4ny8a1 (4ny8 A:11-91)

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.60: SAM domain-like [47768] (16 superfamilies)
   4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins

4. Superfamily a.60.6: DNA polymerase beta, N-terminal domain-like [47802] (2 families)
   contains one classic and one pseudo HhH motifs

5. Family a.60.6.1: DNA polymerase beta, N-terminal domain-like [47803] (3 proteins)

6. Protein DNA polymerase beta, N-terminal (8 kD)-domain [47804] (2 species)
   topologically similar to the second domain

7. Species Human (Homo sapiens) [TaxId:9606] [47805] (144 PDB entries)
   Uniprot P06746

8. Domain d4ny8a1: 4ny8 A:11-91 [257198]
   Other proteins in same PDB: d4ny8a2, d4ny8a3
   automated match to d1tv9a1
   protein/DNA complex; complexed with 0kx, mn, na

Details for d4ny8a1

PDB Entry: 4ny8, 2.25 Å

PDB Description: DNA polymerase beta with O6mG in the template base opposite to incoming non-hydrolyzable CTP with manganese in the active site

PDB Compounds: (A:) DNA polymerase beta

SCOPe Domain Sequences for d4ny8a1:

Sequence; same for both SEQRES and ATOM records:

>d4ny8a1 a.60.6.1 (A:11-91) DNA polymerase beta, N-terminal (8 kD)-domain {Human (Homo sapiens) [TaxId: 9606]}
lnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtkia
ekideflatgklrklekirqd

Timeline for d4ny8a1:

• d4ny8a1 first appeared in SCOPe 2.04
  
• d4ny8a1 appears in SCOPe 2.06
  
• d4ny8a1 appears in the current release, SCOPe 2.08