Lineage for d4kzdl2 (4kzd L:109-215)

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2021374Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2021375Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2025133Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)
  6. 2029182Protein automated matches [190374] (16 species)
    not a true protein
  7. 2030580Species Mouse (Mus musculus) [TaxId:10090] [224855] (498 PDB entries)
  8. 2030994Domain d4kzdl2: 4kzd L:109-215 [256947]
    Other proteins in same PDB: d4kzdl1
    automated match to d4jg1l2
    protein/RNA complex; complexed with 1tu, k, mg, suc

Details for d4kzdl2

PDB Entry: 4kzd (more details), 2.19 Å

PDB Description: crystal structure of an rna aptamer in complex with fluorophore and fab
PDB Compounds: (L:) BL3-6 Fab antibody, light chain

SCOPe Domain Sequences for d4kzdl2:

Sequence; same for both SEQRES and ATOM records: (download)

>d4kzdl2 b.1.1.2 (L:109-215) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
rtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqd
skdstyslsstltlskadyekhkvyacevthqglsspvtksfnrgec

SCOPe Domain Coordinates for d4kzdl2:

Click to download the PDB-style file with coordinates for d4kzdl2.
(The format of our PDB-style files is described here.)

Timeline for d4kzdl2: