Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2015621Fold a.223: Triger factor/SurA peptide-binding domain-like [109997] (1 superfamily)
    multihelical; irregular array of long and short helices
  4. 2015622Superfamily a.223.1: Triger factor/SurA peptide-binding domain-like [109998] (3 families) (S)
    there are sequence and functional similarities between the families, but their structural similarity is obscured by conformational flexibility (in the TF family)
  5. 2015641Family a.223.1.0: automated matches [256442] (1 protein)
    not a true family
  6. 2015642Protein automated matches [256443] (2 species)
    not a true protein

Species:

  1. 2015643Escherichia coli [TaxId:1403831] [256444] (3 PDB entries)
    1. Domain for 2mlx:
    2. Domain for 2mly:
    3. Domain for 2mlz:
  2. 2298832Escherichia coli [TaxId:562] [342133] (2 PDB entries)
    1. Domains for 5owi:
      1. 2298833Domain d5owib3: 5owi B:248-432 [342134]
        Other proteins in same PDB: d5owia1, d5owia2, d5owib1, d5owib2
        automated match to d1w26a1
      2. 2298841Domain d5owia3: 5owi A:248-432 [342142]
        Other proteins in same PDB: d5owia1, d5owia2, d5owib1, d5owib2
        automated match to d1w26a1
    2. Domains for 5owj:
      1. 2298836Domain d5owja3: 5owj A:248-432 [342137]
        Other proteins in same PDB: d5owja1, d5owja2, d5owjb1, d5owjb2
        automated match to d1w26a1
      2. 2298910Domain d5owjb3: 5owj B:248-432 [342211]
        Other proteins in same PDB: d5owja1, d5owja2, d5owjb1, d5owjb2
        automated match to d1w26a1

More info for Protein automated matches from a.223.1.0: automated matches

Timeline for Protein automated matches from a.223.1.0: automated matches: