Lineage for Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1676433Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 1676434Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 1679108Family d.153.1.0: automated matches [191393] (1 protein)
    not a true family
  6. 1679109Protein automated matches [190509] (9 species)
    not a true protein
  7. 1679150Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [256123] (9 PDB entries)

PDB entries in Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]:

  1. Domain(s) for 3un8:
    1. 1679151Domain d3un8f_: 3un8 F: [239871]
      Other proteins in same PDB: d3un8a_, d3un8b_, d3un8c_, d3un8d_, d3un8e_, d3un8g_, d3un8h_, d3un8i_, d3un8j_, d3un8k_, d3un8l_, d3un8m_, d3un8n_, d3un8o_, d3un8p_, d3un8q_, d3un8r_, d3un8s_, d3un8u_, d3un8v_, d3un8w_, d3un8x_, d3un8y_, d3un8z_
      automated match to d1irug_
      complexed with 049
    2. 1679152Domain d3un8t_: 3un8 T: [239872]
      Other proteins in same PDB: d3un8a_, d3un8b_, d3un8c_, d3un8d_, d3un8e_, d3un8g_, d3un8h_, d3un8i_, d3un8j_, d3un8k_, d3un8l_, d3un8m_, d3un8n_, d3un8o_, d3un8p_, d3un8q_, d3un8r_, d3un8s_, d3un8u_, d3un8v_, d3un8w_, d3un8x_, d3un8y_, d3un8z_
      automated match to d1irug_
      complexed with 049
  2. Domain(s) for 4jt0:
    1. 1679160Domain d4jt0c_: 4jt0 C: [253008]
      Other proteins in same PDB: d4jt0a_, d4jt0b_, d4jt0e_, d4jt0g_, d4jt0h_, d4jt0i_, d4jt0j_, d4jt0k_, d4jt0l_, d4jt0m_, d4jt0n_, d4jt0o_, d4jt0p_, d4jt0s_, d4jt0u_, d4jt0v_, d4jt0w_, d4jt0x_, d4jt0y_, d4jt0z_
      automated match to d4eu2a_
      complexed with 0l1, mes
    2. 1679161Domain d4jt0f_: 4jt0 F: [253010]
      Other proteins in same PDB: d4jt0a_, d4jt0b_, d4jt0e_, d4jt0g_, d4jt0h_, d4jt0i_, d4jt0j_, d4jt0k_, d4jt0l_, d4jt0m_, d4jt0n_, d4jt0o_, d4jt0p_, d4jt0s_, d4jt0u_, d4jt0v_, d4jt0w_, d4jt0x_, d4jt0y_, d4jt0z_
      automated match to d1irug_
      complexed with 0l1, mes
    3. 1679162Domain d4jt0q_: 4jt0 Q: [253021]
      Other proteins in same PDB: d4jt0a_, d4jt0b_, d4jt0e_, d4jt0g_, d4jt0h_, d4jt0i_, d4jt0j_, d4jt0k_, d4jt0l_, d4jt0m_, d4jt0n_, d4jt0o_, d4jt0p_, d4jt0s_, d4jt0u_, d4jt0v_, d4jt0w_, d4jt0x_, d4jt0y_, d4jt0z_
      automated match to d4eu2a_
      complexed with 0l1, mes
    4. 1679163Domain d4jt0t_: 4jt0 T: [253023]
      Other proteins in same PDB: d4jt0a_, d4jt0b_, d4jt0e_, d4jt0g_, d4jt0h_, d4jt0i_, d4jt0j_, d4jt0k_, d4jt0l_, d4jt0m_, d4jt0n_, d4jt0o_, d4jt0p_, d4jt0s_, d4jt0u_, d4jt0v_, d4jt0w_, d4jt0x_, d4jt0y_, d4jt0z_
      automated match to d1irug_
      complexed with 0l1, mes
  3. Domain(s) for 4ltc:
  4. Domain(s) for 4nnn:
    1. 1679166Domain d4nnnf_: 4nnn F: [240638]
      Other proteins in same PDB: d4nnna_, d4nnnb_, d4nnnc_, d4nnnd_, d4nnne_, d4nnng_, d4nnnh_, d4nnni_, d4nnnj_, d4nnnk_, d4nnnl_, d4nnnm_, d4nnnn_, d4nnno_, d4nnnp_, d4nnnq_, d4nnnr_, d4nnns_, d4nnnu_, d4nnnv_, d4nnnw_, d4nnnx_, d4nnny_, d4nnnz_
      automated match to d1irug_
      complexed with ald, mg
    2. 1679167Domain d4nnnt_: 4nnn T: [240639]
      Other proteins in same PDB: d4nnna_, d4nnnb_, d4nnnc_, d4nnnd_, d4nnne_, d4nnng_, d4nnnh_, d4nnni_, d4nnnj_, d4nnnk_, d4nnnl_, d4nnnm_, d4nnnn_, d4nnno_, d4nnnp_, d4nnnq_, d4nnnr_, d4nnns_, d4nnnu_, d4nnnv_, d4nnnw_, d4nnnx_, d4nnny_, d4nnnz_
      automated match to d1irug_
      complexed with ald, mg
  5. Domain(s) for 4nnw:
    1. 1679156Domain d4nnwf_: 4nnw F: [240640]
      Other proteins in same PDB: d4nnwa_, d4nnwb_, d4nnwc_, d4nnwd_, d4nnwe_, d4nnwg_, d4nnwh_, d4nnwi_, d4nnwj_, d4nnwk_, d4nnwl_, d4nnwm_, d4nnwn_, d4nnwo_, d4nnwp_, d4nnwq_, d4nnwr_, d4nnws_, d4nnwu_, d4nnwv_, d4nnww_, d4nnwx_, d4nnwy_, d4nnwz_
      automated match to d1irug_
      complexed with 2mk, mg
    2. 1679157Domain d4nnwt_: 4nnw T: [240641]
      Other proteins in same PDB: d4nnwa_, d4nnwb_, d4nnwc_, d4nnwd_, d4nnwe_, d4nnwg_, d4nnwh_, d4nnwi_, d4nnwj_, d4nnwk_, d4nnwl_, d4nnwm_, d4nnwn_, d4nnwo_, d4nnwp_, d4nnwq_, d4nnwr_, d4nnws_, d4nnwu_, d4nnwv_, d4nnww_, d4nnwx_, d4nnwy_, d4nnwz_
      automated match to d1irug_
      complexed with 2mk, mg
  6. Domain(s) for 4no1:
    1. 1679153Domain d4no1f_: 4no1 F: [240642]
      Other proteins in same PDB: d4no1a_, d4no1b_, d4no1c_, d4no1d_, d4no1e_, d4no1g_, d4no1h_, d4no1i_, d4no1j_, d4no1k_, d4no1l_, d4no1m_, d4no1n_, d4no1o_, d4no1p_, d4no1q_, d4no1r_, d4no1s_, d4no1u_, d4no1v_, d4no1w_, d4no1x_, d4no1y_, d4no1z_
      automated match to d1irug_
      complexed with cix, mg
    2. 1679154Domain d4no1t_: 4no1 T: [240643]
      Other proteins in same PDB: d4no1a_, d4no1b_, d4no1c_, d4no1d_, d4no1e_, d4no1g_, d4no1h_, d4no1i_, d4no1j_, d4no1k_, d4no1l_, d4no1m_, d4no1n_, d4no1o_, d4no1p_, d4no1q_, d4no1r_, d4no1s_, d4no1u_, d4no1v_, d4no1w_, d4no1x_, d4no1y_, d4no1z_
      automated match to d1irug_
      complexed with cix, mg
  7. Domain(s) for 4no6:
    1. 1679168Domain d4no6c_: 4no6 C: [253988]
      Other proteins in same PDB: d4no6a_, d4no6b_, d4no6e_, d4no6g_, d4no6h_, d4no6i_, d4no6j_, d4no6k_, d4no6l_, d4no6m_, d4no6n_, d4no6o_, d4no6p_, d4no6s_, d4no6u_, d4no6v_, d4no6w_, d4no6x_, d4no6y_, d4no6z_
      automated match to d4eu2a_
      complexed with 2m1, mg
    2. 1679169Domain d4no6f_: 4no6 F: [253990]
      Other proteins in same PDB: d4no6a_, d4no6b_, d4no6e_, d4no6g_, d4no6h_, d4no6i_, d4no6j_, d4no6k_, d4no6l_, d4no6m_, d4no6n_, d4no6o_, d4no6p_, d4no6s_, d4no6u_, d4no6v_, d4no6w_, d4no6x_, d4no6y_, d4no6z_
      automated match to d1irug_
      complexed with 2m1, mg
    3. 1679170Domain d4no6q_: 4no6 Q: [254001]
      Other proteins in same PDB: d4no6a_, d4no6b_, d4no6e_, d4no6g_, d4no6h_, d4no6i_, d4no6j_, d4no6k_, d4no6l_, d4no6m_, d4no6n_, d4no6o_, d4no6p_, d4no6s_, d4no6u_, d4no6v_, d4no6w_, d4no6x_, d4no6y_, d4no6z_
      automated match to d4eu2a_
      complexed with 2m1, mg
    4. 1679171Domain d4no6t_: 4no6 T: [254003]
      Other proteins in same PDB: d4no6a_, d4no6b_, d4no6e_, d4no6g_, d4no6h_, d4no6i_, d4no6j_, d4no6k_, d4no6l_, d4no6m_, d4no6n_, d4no6o_, d4no6p_, d4no6s_, d4no6u_, d4no6v_, d4no6w_, d4no6x_, d4no6y_, d4no6z_
      automated match to d1irug_
      complexed with 2m1, mg
  8. Domain(s) for 4no8:
    1. 1679158Domain d4no8f_: 4no8 F: [240644]
      Other proteins in same PDB: d4no8a_, d4no8b_, d4no8c_, d4no8d_, d4no8e_, d4no8g_, d4no8h_, d4no8i_, d4no8j_, d4no8k_, d4no8l_, d4no8m_, d4no8n_, d4no8o_, d4no8p_, d4no8q_, d4no8r_, d4no8s_, d4no8u_, d4no8v_, d4no8w_, d4no8x_, d4no8y_, d4no8z_
      automated match to d1irug_
      complexed with 2lv, mg
    2. 1679159Domain d4no8t_: 4no8 T: [240645]
      Other proteins in same PDB: d4no8a_, d4no8b_, d4no8c_, d4no8d_, d4no8e_, d4no8g_, d4no8h_, d4no8i_, d4no8j_, d4no8k_, d4no8l_, d4no8m_, d4no8n_, d4no8o_, d4no8p_, d4no8q_, d4no8r_, d4no8s_, d4no8u_, d4no8v_, d4no8w_, d4no8x_, d4no8y_, d4no8z_
      automated match to d1irug_
      complexed with 2lv, mg
  9. Domain(s) for 4no9:
    1. 1679164Domain d4no9f_: 4no9 F: [240646]
      Other proteins in same PDB: d4no9a_, d4no9b_, d4no9c_, d4no9d_, d4no9e_, d4no9g_, d4no9h_, d4no9i_, d4no9j_, d4no9k_, d4no9l_, d4no9m_, d4no9n_, d4no9o_, d4no9p_, d4no9q_, d4no9r_, d4no9s_, d4no9u_, d4no9v_, d4no9w_, d4no9x_, d4no9y_, d4no9z_
      automated match to d1irug_
      complexed with 2l0, 2lr, mg
    2. 1679165Domain d4no9t_: 4no9 T: [240647]
      Other proteins in same PDB: d4no9a_, d4no9b_, d4no9c_, d4no9d_, d4no9e_, d4no9g_, d4no9h_, d4no9i_, d4no9j_, d4no9k_, d4no9l_, d4no9m_, d4no9n_, d4no9o_, d4no9p_, d4no9q_, d4no9r_, d4no9s_, d4no9u_, d4no9v_, d4no9w_, d4no9x_, d4no9y_, d4no9z_
      automated match to d1irug_
      complexed with 2l0, 2lr, mg

More info for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] from d.153.1.0 automated matches

Timeline for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] from d.153.1.0 automated matches: