Lineage for Species: Influenza A virus [TaxId: 11320]

  1. Root: SCOPe 2.06
  2. 2237529Class h: Coiled coil proteins [57942] (7 folds)
  3. 2238933Fold h.3: Stalk segment of viral fusion proteins [58063] (3 superfamilies)
    core: trimeric coiled coil
  4. 2238934Superfamily h.3.1: Influenza hemagglutinin (stalk) [58064] (2 families) (S)
  5. 2238935Family h.3.1.1: Influenza hemagglutinin (stalk) [58065] (2 protein domains)
  6. 2239322Protein automated matches [254646] (34 species)
    not a true protein
  7. 2239410Species Influenza A virus [TaxId:11320] [255822] (24 PDB entries)

PDB entries in Species: Influenza A virus [TaxId: 11320]:

  1. Domain(s) for 3eyj:
  2. Domain(s) for 3eyk:
  3. Domain(s) for 3s11:
    1. 2239416Domain d3s11b_: 3s11 B: [239708]
      Other proteins in same PDB: d3s11a1, d3s11a2, d3s11c1, d3s11c2, d3s11e1, d3s11e2
      automated match to d4n5zb_
      complexed with gol, nag, tam
    2. 2239417Domain d3s11d_: 3s11 D: [239709]
      Other proteins in same PDB: d3s11a1, d3s11a2, d3s11c1, d3s11c2, d3s11e1, d3s11e2
      automated match to d4n5zb_
      complexed with gol, nag, tam
    3. 2239418Domain d3s11f_: 3s11 F: [239710]
      Other proteins in same PDB: d3s11a1, d3s11a2, d3s11c1, d3s11c2, d3s11e1, d3s11e2
      automated match to d4n5zb_
      complexed with gol, nag, tam
  4. Domain(s) for 3zp1:
  5. Domain(s) for 3zp2:
  6. Domain(s) for 4k3x:
    1. 2239411Domain d4k3xb1: 4k3x B:6-174 [240376]
      Other proteins in same PDB: d4k3xa_, d4k3xb2, d4k3xc_, d4k3xd2, d4k3xe_, d4k3xf2
      automated match to d4n5zb_
      complexed with nag, p4g
    2. 2239412Domain d4k3xd1: 4k3x D:6-174 [240377]
      Other proteins in same PDB: d4k3xa_, d4k3xb2, d4k3xc_, d4k3xd2, d4k3xe_, d4k3xf2
      automated match to d4n5zb_
      complexed with nag, p4g
    3. 2239413Domain d4k3xf1: 4k3x F:6-174 [240378]
      Other proteins in same PDB: d4k3xa_, d4k3xb2, d4k3xc_, d4k3xd2, d4k3xe_, d4k3xf2
      automated match to d4n5zb_
      complexed with nag, p4g
  7. Domain(s) for 4lkg:
    1. 2239470Domain d4lkgb_: 4lkg B: [240477]
      Other proteins in same PDB: d4lkga_, d4lkgc_, d4lkge_
      automated match to d2viub_
      complexed with nag
    2. 2239471Domain d4lkgd_: 4lkg D: [240478]
      Other proteins in same PDB: d4lkga_, d4lkgc_, d4lkge_
      automated match to d2viub_
      complexed with nag
    3. 2239472Domain d4lkgf_: 4lkg F: [240479]
      Other proteins in same PDB: d4lkga_, d4lkgc_, d4lkge_
      automated match to d2viub_
      complexed with nag
  8. Domain(s) for 4lkh:
  9. Domain(s) for 4lki:
  10. Domain(s) for 4lkj:
  11. Domain(s) for 4lkk:
  12. Domain(s) for 4qy0:
    1. 2239425Domain d4qy0b_: 4qy0 B: [268630]
      Other proteins in same PDB: d4qy0a_, d4qy0c_, d4qy0e_, d4qy0g_, d4qy0i_, d4qy0k_
      automated match to d4d00d_
      complexed with nag
    2. 2239426Domain d4qy0d_: 4qy0 D: [268637]
      Other proteins in same PDB: d4qy0a_, d4qy0c_, d4qy0e_, d4qy0g_, d4qy0i_, d4qy0k_
      automated match to d4d00d_
      complexed with nag
    3. 2239427Domain d4qy0f_: 4qy0 F: [268627]
      Other proteins in same PDB: d4qy0a_, d4qy0c_, d4qy0e_, d4qy0g_, d4qy0i_, d4qy0k_
      automated match to d4d00d_
      complexed with nag
    4. 2239428Domain d4qy0h_: 4qy0 H: [268633]
      Other proteins in same PDB: d4qy0a_, d4qy0c_, d4qy0e_, d4qy0g_, d4qy0i_, d4qy0k_
      automated match to d4d00d_
      complexed with nag
    5. 2239429Domain d4qy0j_: 4qy0 J: [268638]
      Other proteins in same PDB: d4qy0a_, d4qy0c_, d4qy0e_, d4qy0g_, d4qy0i_, d4qy0k_
      automated match to d4d00d_
      complexed with nag
    6. 2239430Domain d4qy0l_: 4qy0 L: [268628]
      Other proteins in same PDB: d4qy0a_, d4qy0c_, d4qy0e_, d4qy0g_, d4qy0i_, d4qy0k_
      automated match to d4d00d_
      complexed with nag
  13. Domain(s) for 4qy1:
    1. 2239431Domain d4qy1b_: 4qy1 B: [268626]
      Other proteins in same PDB: d4qy1a_, d4qy1c_, d4qy1e_, d4qy1g_, d4qy1i_, d4qy1k_, d4qy1m_, d4qy1o_, d4qy1q_, d4qy1s_, d4qy1u_, d4qy1w_
      automated match to d4d00d_
      complexed with nag
    2. 2239432Domain d4qy1d_: 4qy1 D: [268660]
      Other proteins in same PDB: d4qy1a_, d4qy1c_, d4qy1e_, d4qy1g_, d4qy1i_, d4qy1k_, d4qy1m_, d4qy1o_, d4qy1q_, d4qy1s_, d4qy1u_, d4qy1w_
      automated match to d4d00d_
      complexed with nag
    3. 2239433Domain d4qy1f_: 4qy1 F: [268642]
      Other proteins in same PDB: d4qy1a_, d4qy1c_, d4qy1e_, d4qy1g_, d4qy1i_, d4qy1k_, d4qy1m_, d4qy1o_, d4qy1q_, d4qy1s_, d4qy1u_, d4qy1w_
      automated match to d4d00d_
      complexed with nag
    4. 2239434Domain d4qy1h_: 4qy1 H: [268643]
      Other proteins in same PDB: d4qy1a_, d4qy1c_, d4qy1e_, d4qy1g_, d4qy1i_, d4qy1k_, d4qy1m_, d4qy1o_, d4qy1q_, d4qy1s_, d4qy1u_, d4qy1w_
      automated match to d4d00d_
      complexed with nag
    5. 2239435Domain d4qy1j_: 4qy1 J: [268645]
      Other proteins in same PDB: d4qy1a_, d4qy1c_, d4qy1e_, d4qy1g_, d4qy1i_, d4qy1k_, d4qy1m_, d4qy1o_, d4qy1q_, d4qy1s_, d4qy1u_, d4qy1w_
      automated match to d4d00d_
      complexed with nag
    6. 2239436Domain d4qy1l_: 4qy1 L: [268648]
      Other proteins in same PDB: d4qy1a_, d4qy1c_, d4qy1e_, d4qy1g_, d4qy1i_, d4qy1k_, d4qy1m_, d4qy1o_, d4qy1q_, d4qy1s_, d4qy1u_, d4qy1w_
      automated match to d4d00d_
      complexed with nag
    7. 2239437Domain d4qy1n_: 4qy1 N: [268644]
      Other proteins in same PDB: d4qy1a_, d4qy1c_, d4qy1e_, d4qy1g_, d4qy1i_, d4qy1k_, d4qy1m_, d4qy1o_, d4qy1q_, d4qy1s_, d4qy1u_, d4qy1w_
      automated match to d4d00d_
      complexed with nag
    8. 2239438Domain d4qy1p_: 4qy1 P: [268662]
      Other proteins in same PDB: d4qy1a_, d4qy1c_, d4qy1e_, d4qy1g_, d4qy1i_, d4qy1k_, d4qy1m_, d4qy1o_, d4qy1q_, d4qy1s_, d4qy1u_, d4qy1w_
      automated match to d4d00d_
      complexed with nag
    9. 2239439Domain d4qy1r_: 4qy1 R: [268661]
      Other proteins in same PDB: d4qy1a_, d4qy1c_, d4qy1e_, d4qy1g_, d4qy1i_, d4qy1k_, d4qy1m_, d4qy1o_, d4qy1q_, d4qy1s_, d4qy1u_, d4qy1w_
      automated match to d4d00d_
      complexed with nag
    10. 2239440Domain d4qy1t_: 4qy1 T: [268663]
      Other proteins in same PDB: d4qy1a_, d4qy1c_, d4qy1e_, d4qy1g_, d4qy1i_, d4qy1k_, d4qy1m_, d4qy1o_, d4qy1q_, d4qy1s_, d4qy1u_, d4qy1w_
      automated match to d4d00d_
      complexed with nag
    11. 2239441Domain d4qy1v_: 4qy1 V: [268657]
      Other proteins in same PDB: d4qy1a_, d4qy1c_, d4qy1e_, d4qy1g_, d4qy1i_, d4qy1k_, d4qy1m_, d4qy1o_, d4qy1q_, d4qy1s_, d4qy1u_, d4qy1w_
      automated match to d4d00d_
      complexed with nag
    12. 2239442Domain d4qy1x_: 4qy1 X: [268653]
      Other proteins in same PDB: d4qy1a_, d4qy1c_, d4qy1e_, d4qy1g_, d4qy1i_, d4qy1k_, d4qy1m_, d4qy1o_, d4qy1q_, d4qy1s_, d4qy1u_, d4qy1w_
      automated match to d4d00d_
      complexed with nag
  14. Domain(s) for 4qy2:
    1. 2239419Domain d4qy2b_: 4qy2 B: [268654]
      Other proteins in same PDB: d4qy2a_, d4qy2c_, d4qy2e_, d4qy2g_, d4qy2i_, d4qy2k_
      automated match to d4d00d_
      complexed with nag, sia
    2. 2239420Domain d4qy2d_: 4qy2 D: [268676]
      Other proteins in same PDB: d4qy2a_, d4qy2c_, d4qy2e_, d4qy2g_, d4qy2i_, d4qy2k_
      automated match to d4d00d_
      complexed with nag, sia
    3. 2239421Domain d4qy2f_: 4qy2 F: [268659]
      Other proteins in same PDB: d4qy2a_, d4qy2c_, d4qy2e_, d4qy2g_, d4qy2i_, d4qy2k_
      automated match to d4d00d_
      complexed with nag, sia
    4. 2239422Domain d4qy2h_: 4qy2 H: [268675]
      Other proteins in same PDB: d4qy2a_, d4qy2c_, d4qy2e_, d4qy2g_, d4qy2i_, d4qy2k_
      automated match to d4d00d_
      complexed with nag, sia
    5. 2239423Domain d4qy2j_: 4qy2 J: [268673]
      Other proteins in same PDB: d4qy2a_, d4qy2c_, d4qy2e_, d4qy2g_, d4qy2i_, d4qy2k_
      automated match to d4d00d_
      complexed with nag, sia
    6. 2239424Domain d4qy2l_: 4qy2 L: [268667]
      Other proteins in same PDB: d4qy2a_, d4qy2c_, d4qy2e_, d4qy2g_, d4qy2i_, d4qy2k_
      automated match to d4d00d_
      complexed with nag, sia
  15. Domain(s) for 4wst:
    1. 2239443Domain d4wstb_: 4wst B: [269509]
      Other proteins in same PDB: d4wsta1, d4wsta2, d4wstc1, d4wstc2, d4wste1, d4wste2, d4wstg1, d4wstg2, d4wsti1, d4wsti2, d4wstk1, d4wstk2
      automated match to d4kthd_
      complexed with nag
    2. 2239444Domain d4wstd_: 4wst D: [269513]
      Other proteins in same PDB: d4wsta1, d4wsta2, d4wstc1, d4wstc2, d4wste1, d4wste2, d4wstg1, d4wstg2, d4wsti1, d4wsti2, d4wstk1, d4wstk2
      automated match to d4kthd_
      complexed with nag
    3. 2239445Domain d4wstf_: 4wst F: [269520]
      Other proteins in same PDB: d4wsta1, d4wsta2, d4wstc1, d4wstc2, d4wste1, d4wste2, d4wstg1, d4wstg2, d4wsti1, d4wsti2, d4wstk1, d4wstk2
      automated match to d4kthd_
      complexed with nag
    4. 2239446Domain d4wsth_: 4wst H: [269516]
      Other proteins in same PDB: d4wsta1, d4wsta2, d4wstc1, d4wstc2, d4wste1, d4wste2, d4wstg1, d4wstg2, d4wsti1, d4wsti2, d4wstk1, d4wstk2
      automated match to d4kthd_
      complexed with nag
    5. 2239447Domain d4wstj_: 4wst J: [269521]
      Other proteins in same PDB: d4wsta1, d4wsta2, d4wstc1, d4wstc2, d4wste1, d4wste2, d4wstg1, d4wstg2, d4wsti1, d4wsti2, d4wstk1, d4wstk2
      automated match to d4kthd_
      complexed with nag
    6. 2239448Domain d4wstl_: 4wst L: [269524]
      Other proteins in same PDB: d4wsta1, d4wsta2, d4wstc1, d4wstc2, d4wste1, d4wste2, d4wstg1, d4wstg2, d4wsti1, d4wsti2, d4wstk1, d4wstk2
      automated match to d4kthd_
      complexed with nag
  16. Domain(s) for 4wsu:
    1. 2239452Domain d4wsub_: 4wsu B: [269470]
      Other proteins in same PDB: d4wsua1, d4wsua2, d4wsuc1, d4wsuc2, d4wsue1, d4wsue2
      automated match to d4kthd_
      complexed with gal, nag, sia
    2. 2239453Domain d4wsud_: 4wsu D: [269469]
      Other proteins in same PDB: d4wsua1, d4wsua2, d4wsuc1, d4wsuc2, d4wsue1, d4wsue2
      automated match to d4kthd_
      complexed with gal, nag, sia
    3. 2239454Domain d4wsuf_: 4wsu F: [269471]
      Other proteins in same PDB: d4wsua1, d4wsua2, d4wsuc1, d4wsuc2, d4wsue1, d4wsue2
      automated match to d4kthd_
      complexed with gal, nag, sia
  17. Domain(s) for 4wsx:
    1. 2239456Domain d4wsxb_: 4wsx B: [269489]
      Other proteins in same PDB: d4wsxa_, d4wsxc_, d4wsxe_, d4wsxg_, d4wsxi_, d4wsxk_, d4wsxm_, d4wsxo_, d4wsxq_, d4wsxs_, d4wsxu_, d4wsxw_
      automated match to d4d00d_
      complexed with nag
    2. 2239457Domain d4wsxd_: 4wsx D: [269491]
      Other proteins in same PDB: d4wsxa_, d4wsxc_, d4wsxe_, d4wsxg_, d4wsxi_, d4wsxk_, d4wsxm_, d4wsxo_, d4wsxq_, d4wsxs_, d4wsxu_, d4wsxw_
      automated match to d4d00d_
      complexed with nag
    3. 2239458Domain d4wsxf_: 4wsx F: [269492]
      Other proteins in same PDB: d4wsxa_, d4wsxc_, d4wsxe_, d4wsxg_, d4wsxi_, d4wsxk_, d4wsxm_, d4wsxo_, d4wsxq_, d4wsxs_, d4wsxu_, d4wsxw_
      automated match to d4d00d_
      complexed with nag
    4. 2239459Domain d4wsxh_: 4wsx H: [269494]
      Other proteins in same PDB: d4wsxa_, d4wsxc_, d4wsxe_, d4wsxg_, d4wsxi_, d4wsxk_, d4wsxm_, d4wsxo_, d4wsxq_, d4wsxs_, d4wsxu_, d4wsxw_
      automated match to d4d00d_
      complexed with nag
    5. 2239460Domain d4wsxj_: 4wsx J: [269497]
      Other proteins in same PDB: d4wsxa_, d4wsxc_, d4wsxe_, d4wsxg_, d4wsxi_, d4wsxk_, d4wsxm_, d4wsxo_, d4wsxq_, d4wsxs_, d4wsxu_, d4wsxw_
      automated match to d4d00d_
      complexed with nag
    6. 2239461Domain d4wsxl_: 4wsx L: [269499]
      Other proteins in same PDB: d4wsxa_, d4wsxc_, d4wsxe_, d4wsxg_, d4wsxi_, d4wsxk_, d4wsxm_, d4wsxo_, d4wsxq_, d4wsxs_, d4wsxu_, d4wsxw_
      automated match to d4d00d_
      complexed with nag
    7. 2239462Domain d4wsxn_: 4wsx N: [269501]
      Other proteins in same PDB: d4wsxa_, d4wsxc_, d4wsxe_, d4wsxg_, d4wsxi_, d4wsxk_, d4wsxm_, d4wsxo_, d4wsxq_, d4wsxs_, d4wsxu_, d4wsxw_
      automated match to d4d00d_
      complexed with nag
    8. 2239463Domain d4wsxp_: 4wsx P: [269500]
      Other proteins in same PDB: d4wsxa_, d4wsxc_, d4wsxe_, d4wsxg_, d4wsxi_, d4wsxk_, d4wsxm_, d4wsxo_, d4wsxq_, d4wsxs_, d4wsxu_, d4wsxw_
      automated match to d4d00d_
      complexed with nag
    9. 2239464Domain d4wsxr_: 4wsx R: [269505]
      Other proteins in same PDB: d4wsxa_, d4wsxc_, d4wsxe_, d4wsxg_, d4wsxi_, d4wsxk_, d4wsxm_, d4wsxo_, d4wsxq_, d4wsxs_, d4wsxu_, d4wsxw_
      automated match to d4d00d_
      complexed with nag
    10. 2239465Domain d4wsxt_: 4wsx T: [269507]
      Other proteins in same PDB: d4wsxa_, d4wsxc_, d4wsxe_, d4wsxg_, d4wsxi_, d4wsxk_, d4wsxm_, d4wsxo_, d4wsxq_, d4wsxs_, d4wsxu_, d4wsxw_
      automated match to d4d00d_
      complexed with nag
    11. 2239466Domain d4wsxv_: 4wsx V: [269515]
      Other proteins in same PDB: d4wsxa_, d4wsxc_, d4wsxe_, d4wsxg_, d4wsxi_, d4wsxk_, d4wsxm_, d4wsxo_, d4wsxq_, d4wsxs_, d4wsxu_, d4wsxw_
      automated match to d4d00d_
      complexed with nag
    12. 2239467Domain d4wsxx_: 4wsx X: [269514]
      Other proteins in same PDB: d4wsxa_, d4wsxc_, d4wsxe_, d4wsxg_, d4wsxi_, d4wsxk_, d4wsxm_, d4wsxo_, d4wsxq_, d4wsxs_, d4wsxu_, d4wsxw_
      automated match to d4d00d_
      complexed with nag
  18. Domain(s) for 5tgo:
    1. 2289444Domain d5tgob_: 5tgo B: [332745]
      Other proteins in same PDB: d5tgoa_, d5tgoc_, d5tgoe_
      automated match to d3m5jb_
      complexed with bma, man, nag; mutant
    2. 2289457Domain d5tgof_: 5tgo F: [332758]
      Other proteins in same PDB: d5tgoa_, d5tgoc_, d5tgoe_
      automated match to d3m5jb_
      complexed with bma, man, nag; mutant
    3. 2289547Domain d5tgod_: 5tgo D: [332848]
      Other proteins in same PDB: d5tgoa_, d5tgoc_, d5tgoe_
      automated match to d3m5jb_
      complexed with bma, man, nag; mutant
  19. Domain(s) for 5tgu:
    1. 2289458Domain d5tgub_: 5tgu B: [332759]
      Other proteins in same PDB: d5tgua_, d5tguc_, d5tgue_
      automated match to d3m5jb_
      complexed with bma, gal, man, nag, sia; mutant
    2. 2289508Domain d5tguf_: 5tgu F: [332809]
      Other proteins in same PDB: d5tgua_, d5tguc_, d5tgue_
      automated match to d3m5jb_
      complexed with bma, gal, man, nag, sia; mutant
    3. 2289538Domain d5tgud_: 5tgu D: [332839]
      Other proteins in same PDB: d5tgua_, d5tguc_, d5tgue_
      automated match to d3m5jb_
      complexed with bma, gal, man, nag, sia; mutant
  20. Domain(s) for 5tgv:
    1. 2289423Domain d5tgvf_: 5tgv F: [332724]
      Other proteins in same PDB: d5tgva_, d5tgvc_, d5tgve_
      automated match to d3m5jb_
      complexed with bma, gal, nag, sia; mutant
    2. 2289445Domain d5tgvb_: 5tgv B: [332746]
      Other proteins in same PDB: d5tgva_, d5tgvc_, d5tgve_
      automated match to d3m5jb_
      complexed with bma, gal, nag, sia; mutant
    3. 2289447Domain d5tgvd_: 5tgv D: [332748]
      Other proteins in same PDB: d5tgva_, d5tgvc_, d5tgve_
      automated match to d3m5jb_
      complexed with bma, gal, nag, sia; mutant
  21. Domain(s) for 5th0:
    1. 2289446Domain d5th0f_: 5th0 F: [332747]
      Other proteins in same PDB: d5th0a_, d5th0c_, d5th0e_
      automated match to d3m5jb_
      complexed with bma, man, nag; mutant
    2. 2289462Domain d5th0d_: 5th0 D: [332763]
      Other proteins in same PDB: d5th0a_, d5th0c_, d5th0e_
      automated match to d3m5jb_
      complexed with bma, man, nag; mutant
    3. 2289558Domain d5th0b_: 5th0 B: [332859]
      Other proteins in same PDB: d5th0a_, d5th0c_, d5th0e_
      automated match to d3m5jb_
      complexed with bma, man, nag; mutant
  22. Domain(s) for 5th1:
    1. 2289451Domain d5th1b_: 5th1 B: [332752]
      Other proteins in same PDB: d5th1a_, d5th1c_, d5th1e_
      automated match to d3m5jb_
      complexed with bma, gal, man, nag, sia; mutant
    2. 2289561Domain d5th1d_: 5th1 D: [332862]
      Other proteins in same PDB: d5th1a_, d5th1c_, d5th1e_
      automated match to d3m5jb_
      complexed with bma, gal, man, nag, sia; mutant
    3. 2289565Domain d5th1f_: 5th1 F: [332866]
      Other proteins in same PDB: d5th1a_, d5th1c_, d5th1e_
      automated match to d3m5jb_
      complexed with bma, gal, man, nag, sia; mutant
  23. Domain(s) for 5thb:
    1. 2289416Domain d5thbd_: 5thb D: [332717]
      Other proteins in same PDB: d5thba_, d5thbc_, d5thbe_
      automated match to d3m5jb_
      complexed with bma, man, nag; mutant
    2. 2289480Domain d5thbb_: 5thb B: [332781]
      Other proteins in same PDB: d5thba_, d5thbc_, d5thbe_
      automated match to d3m5jb_
      complexed with bma, man, nag; mutant
    3. 2289491Domain d5thbf_: 5thb F: [332792]
      Other proteins in same PDB: d5thba_, d5thbc_, d5thbe_
      automated match to d3m5jb_
      complexed with bma, man, nag; mutant
  24. Domain(s) for 5thc:
    1. 2289421Domain d5thcb_: 5thc B: [332722]
      Other proteins in same PDB: d5thca_, d5thcc_, d5thce_
      automated match to d3m5jb_
      complexed with bma, gal, man, nag, sia; mutant
    2. 2289453Domain d5thcf_: 5thc F: [332754]
      Other proteins in same PDB: d5thca_, d5thcc_, d5thce_
      automated match to d3m5jb_
      complexed with bma, gal, man, nag, sia; mutant
    3. 2289456Domain d5thcd_: 5thc D: [332757]
      Other proteins in same PDB: d5thca_, d5thcc_, d5thce_
      automated match to d3m5jb_
      complexed with bma, gal, man, nag, sia; mutant

More info for Species Influenza A virus [TaxId:11320] from h.3.1.1 automated matches

Timeline for Species Influenza A virus [TaxId:11320] from h.3.1.1 automated matches: