Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2538746Fold d.129: TBP-like [55944] (11 superfamilies)
    beta-alpha-beta(4)-alpha
  4. 2538955Superfamily d.129.2: Phosphoglucomutase, C-terminal domain [55957] (2 families) (S)
    contains a single copy of this fold and an extra beta-strand at the C-terminus
  5. 2538994Family d.129.2.0: automated matches [254315] (1 protein)
    not a true family
  6. 2538995Protein automated matches [254722] (3 species)
    not a true protein

Species:

  1. 2538996Human (Homo sapiens) [TaxId:9606] [316258] (5 PDB entries)
    1. Domains for 5epc:
      1. 2538999Domain d5epca4: 5epc A:422-562 [316627]
        Other proteins in same PDB: d5epca1, d5epca2, d5epca3, d5epca5, d5epcb1, d5epcb2, d5epcb3, d5epcb5
        automated match to d5f9ca4
        complexed with gol, mg, so4
      2. 2539000Domain d5epcb4: 5epc B:422-562 [316632]
        Other proteins in same PDB: d5epca1, d5epca2, d5epca3, d5epca5, d5epcb1, d5epcb2, d5epcb3, d5epcb5
        automated match to d5f9ca4
        complexed with gol, mg, so4
    2. Domains for 5f9c:
      1. 2539001Domain d5f9ca4: 5f9c A:422-562 [316273]
        Other proteins in same PDB: d5f9ca1, d5f9ca2, d5f9ca3, d5f9cb1, d5f9cb2, d5f9cb3
        automated match to d3pmga4
        complexed with gol, mg, so4; mutant
      2. 2539002Domain d5f9cb4: 5f9c B:422-562 [316383]
        Other proteins in same PDB: d5f9ca1, d5f9ca2, d5f9ca3, d5f9cb1, d5f9cb2, d5f9cb3
        automated match to d3pmga4
        complexed with gol, mg, so4; mutant
    3. Domains for 5hsh:
      1. 2539005Domain d5hsha4: 5hsh A:422-562 [316407]
        Other proteins in same PDB: d5hsha1, d5hsha2, d5hsha3, d5hshb1, d5hshb2, d5hshb3
        automated match to d3pmga4
        complexed with so4; mutant
      2. 2539006Domain d5hshb4: 5hsh B:422-562 [316300]
        Other proteins in same PDB: d5hsha1, d5hsha2, d5hsha3, d5hshb1, d5hshb2, d5hshb3
        automated match to d3pmga4
        complexed with so4; mutant
    4. Domains for 5jn5:
      1. 2538997Domain d5jn5a4: 5jn5 A:422-562 [329493]
        Other proteins in same PDB: d5jn5a1, d5jn5a2, d5jn5a3, d5jn5a5, d5jn5b1, d5jn5b2, d5jn5b3
        automated match to d5f9ca4
        complexed with ca, so4
      2. 2538998Domain d5jn5b4: 5jn5 B:422-562 [329450]
        Other proteins in same PDB: d5jn5a1, d5jn5a2, d5jn5a3, d5jn5a5, d5jn5b1, d5jn5b2, d5jn5b3
        automated match to d5f9ca4
        complexed with ca, so4
    5. Domains for 5tr2:
      1. 2539003Domain d5tr2a4: 5tr2 A:422-562 [329666]
        Other proteins in same PDB: d5tr2a1, d5tr2a2, d5tr2a3, d5tr2a5, d5tr2b1, d5tr2b2, d5tr2b3
        automated match to d5f9ca4
        complexed with ca, gol, so4
      2. 2539004Domain d5tr2b4: 5tr2 B:422-562 [329561]
        Other proteins in same PDB: d5tr2a1, d5tr2a2, d5tr2a3, d5tr2a5, d5tr2b1, d5tr2b2, d5tr2b3
        automated match to d5f9ca4
        complexed with ca, gol, so4
  2. 2539007Pseudomonas aeruginosa [TaxId:287] [256064] (1 PDB entry)
  3. 2539009Pseudomonas aeruginosa, PA01 [TaxId:208964] [256305] (2 PDB entries)
    1. Domain for 4il8:
    2. Domain for 4mrq:

More info for Protein automated matches from d.129.2.0: automated matches

Timeline for Protein automated matches from d.129.2.0: automated matches: