Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2159229Fold c.84: Phosphoglucomutase, first 3 domains [53737] (1 superfamily)
    consists of three similar domains with 3 layers (a/b/a) each; duplication
    core: mixed beta-sheet of 4 strands, order 2134, strand 4 is antiparallel to the rest
  4. 2159230Superfamily c.84.1: Phosphoglucomutase, first 3 domains [53738] (2 families) (S)
  5. 2159322Family c.84.1.0: automated matches [254314] (1 protein)
    not a true family
  6. 2159323Protein automated matches [254721] (3 species)
    not a true protein

Species:

  1. 2159324Homo sapiens [TaxId:9606] [316254] (5 PDB entries)
    1. Domains for 5epc:
      1. 2159331Domain d5epca1: 5epc A:1-191 [316624]
        Other proteins in same PDB: d5epca4, d5epca5, d5epcb4, d5epcb5
        automated match to d5f9ca1
        complexed with gol, mg, so4
      2. 2159332Domain d5epca2: 5epc A:192-304 [316625]
        Other proteins in same PDB: d5epca4, d5epca5, d5epcb4, d5epcb5
        automated match to d5f9ca2
        complexed with gol, mg, so4
      3. 2159333Domain d5epca3: 5epc A:305-421 [316626]
        Other proteins in same PDB: d5epca4, d5epca5, d5epcb4, d5epcb5
        automated match to d5f9ca3
        complexed with gol, mg, so4
      4. 2159334Domain d5epcb1: 5epc B:1-191 [316629]
        Other proteins in same PDB: d5epca4, d5epca5, d5epcb4, d5epcb5
        automated match to d5f9ca1
        complexed with gol, mg, so4
      5. 2159335Domain d5epcb2: 5epc B:192-304 [316630]
        Other proteins in same PDB: d5epca4, d5epca5, d5epcb4, d5epcb5
        automated match to d5f9ca2
        complexed with gol, mg, so4
      6. 2159336Domain d5epcb3: 5epc B:305-421 [316631]
        Other proteins in same PDB: d5epca4, d5epca5, d5epcb4, d5epcb5
        automated match to d5f9ca3
        complexed with gol, mg, so4
    2. Domains for 5f9c:
      1. 2159337Domain d5f9ca1: 5f9c A:1-191 [316270]
        Other proteins in same PDB: d5f9ca4, d5f9cb4
        automated match to d3pmga1
        complexed with gol, mg, so4; mutant
      2. 2159338Domain d5f9ca2: 5f9c A:192-304 [316271]
        Other proteins in same PDB: d5f9ca4, d5f9cb4
        automated match to d3pmga2
        complexed with gol, mg, so4; mutant
      3. 2159339Domain d5f9ca3: 5f9c A:305-421 [316272]
        Other proteins in same PDB: d5f9ca4, d5f9cb4
        automated match to d3pmga3
        complexed with gol, mg, so4; mutant
      4. 2159340Domain d5f9cb1: 5f9c B:2-191 [316380]
        Other proteins in same PDB: d5f9ca4, d5f9cb4
        automated match to d3pmga1
        complexed with gol, mg, so4; mutant
      5. 2159341Domain d5f9cb2: 5f9c B:192-304 [316381]
        Other proteins in same PDB: d5f9ca4, d5f9cb4
        automated match to d3pmga2
        complexed with gol, mg, so4; mutant
      6. 2159342Domain d5f9cb3: 5f9c B:305-421 [316382]
        Other proteins in same PDB: d5f9ca4, d5f9cb4
        automated match to d3pmga3
        complexed with gol, mg, so4; mutant
    3. Domains for 5hsh:
      1. 2159349Domain d5hsha1: 5hsh A:1-191 [316404]
        Other proteins in same PDB: d5hsha4, d5hshb4
        automated match to d3pmga1
        complexed with so4; mutant
      2. 2159350Domain d5hsha2: 5hsh A:192-304 [316405]
        Other proteins in same PDB: d5hsha4, d5hshb4
        automated match to d3pmga2
        complexed with so4; mutant
      3. 2159351Domain d5hsha3: 5hsh A:305-421 [316406]
        Other proteins in same PDB: d5hsha4, d5hshb4
        automated match to d3pmga3
        complexed with so4; mutant
      4. 2159352Domain d5hshb1: 5hsh B:1-191 [316297]
        Other proteins in same PDB: d5hsha4, d5hshb4
        automated match to d3pmga1
        complexed with so4; mutant
      5. 2159353Domain d5hshb2: 5hsh B:192-304 [316298]
        Other proteins in same PDB: d5hsha4, d5hshb4
        automated match to d3pmga2
        complexed with so4; mutant
      6. 2159354Domain d5hshb3: 5hsh B:305-421 [316299]
        Other proteins in same PDB: d5hsha4, d5hshb4
        automated match to d3pmga3
        complexed with so4; mutant
    4. Domains for 5jn5:
      1. 2159325Domain d5jn5a1: 5jn5 A:1-191 [329490]
        Other proteins in same PDB: d5jn5a4, d5jn5a5, d5jn5b4
        automated match to d5hshb1
        complexed with ca, so4
      2. 2159326Domain d5jn5a2: 5jn5 A:192-304 [329491]
        Other proteins in same PDB: d5jn5a4, d5jn5a5, d5jn5b4
        automated match to d5f9ca2
        complexed with ca, so4
      3. 2159327Domain d5jn5a3: 5jn5 A:305-421 [329492]
        Other proteins in same PDB: d5jn5a4, d5jn5a5, d5jn5b4
        automated match to d5f9ca3
        complexed with ca, so4
      4. 2159328Domain d5jn5b1: 5jn5 B:2-191 [329447]
        Other proteins in same PDB: d5jn5a4, d5jn5a5, d5jn5b4
        automated match to d5hshb1
        complexed with ca, so4
      5. 2159329Domain d5jn5b2: 5jn5 B:192-304 [329448]
        Other proteins in same PDB: d5jn5a4, d5jn5a5, d5jn5b4
        automated match to d5f9ca2
        complexed with ca, so4
      6. 2159330Domain d5jn5b3: 5jn5 B:305-421 [329449]
        Other proteins in same PDB: d5jn5a4, d5jn5a5, d5jn5b4
        automated match to d5f9ca3
        complexed with ca, so4
    5. Domains for 5tr2:
      1. 2159343Domain d5tr2a1: 5tr2 A:1-191 [329663]
        Other proteins in same PDB: d5tr2a4, d5tr2a5, d5tr2b4
        automated match to d5hshb1
        complexed with ca, gol, so4
      2. 2159344Domain d5tr2a2: 5tr2 A:192-304 [329664]
        Other proteins in same PDB: d5tr2a4, d5tr2a5, d5tr2b4
        automated match to d5f9ca2
        complexed with ca, gol, so4
      3. 2159345Domain d5tr2a3: 5tr2 A:305-421 [329665]
        Other proteins in same PDB: d5tr2a4, d5tr2a5, d5tr2b4
        automated match to d5f9ca3
        complexed with ca, gol, so4
      4. 2159346Domain d5tr2b1: 5tr2 B:2-191 [329558]
        Other proteins in same PDB: d5tr2a4, d5tr2a5, d5tr2b4
        automated match to d5hshb1
        complexed with ca, gol, so4
      5. 2159347Domain d5tr2b2: 5tr2 B:192-304 [329559]
        Other proteins in same PDB: d5tr2a4, d5tr2a5, d5tr2b4
        automated match to d5f9ca2
        complexed with ca, gol, so4
      6. 2159348Domain d5tr2b3: 5tr2 B:305-421 [329560]
        Other proteins in same PDB: d5tr2a4, d5tr2a5, d5tr2b4
        automated match to d5f9ca3
        complexed with ca, gol, so4
  2. 2159355Pseudomonas aeruginosa [TaxId:287] [256063] (1 PDB entry)
  3. 2159359Pseudomonas aeruginosa, PA01 [TaxId:208964] [256304] (2 PDB entries)
    1. Domains for 4il8:
      1. 2159360Domain d4il8a1: 4il8 A:5-154 [252640]
        Other proteins in same PDB: d4il8a4
        automated match to d1k2yx1
        complexed with gol, mg; mutant
      2. 2159361Domain d4il8a2: 4il8 A:155-258 [252641]
        Other proteins in same PDB: d4il8a4
        automated match to d1p5dx2
        complexed with gol, mg; mutant
      3. 2159362Domain d4il8a3: 4il8 A:259-367 [252642]
        Other proteins in same PDB: d4il8a4
        automated match to d1p5dx3
        complexed with gol, mg; mutant
    2. Domains for 4mrq:
      1. 2159363Domain d4mrqa1: 4mrq A:9-154 [253827]
        Other proteins in same PDB: d4mrqa4
        automated match to d1k2yx1
        complexed with edo, peg, pge, tla, zn
      2. 2159364Domain d4mrqa2: 4mrq A:155-258 [253828]
        Other proteins in same PDB: d4mrqa4
        automated match to d1p5dx2
        complexed with edo, peg, pge, tla, zn
      3. 2159365Domain d4mrqa3: 4mrq A:259-367 [253829]
        Other proteins in same PDB: d4mrqa4
        automated match to d1p5dx3
        complexed with edo, peg, pge, tla, zn

More info for Protein automated matches from c.84.1.0: automated matches

Timeline for Protein automated matches from c.84.1.0: automated matches: