Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2483048Fold c.84: Phosphoglucomutase, first 3 domains [53737] (1 superfamily)
    consists of three similar domains with 3 layers (a/b/a) each; duplication
    core: mixed beta-sheet of 4 strands, order 2134, strand 4 is antiparallel to the rest
  4. 2483049Superfamily c.84.1: Phosphoglucomutase, first 3 domains [53738] (2 families) (S)
  5. 2483141Family c.84.1.0: automated matches [254314] (1 protein)
    not a true family
  6. 2483142Protein automated matches [254721] (3 species)
    not a true protein

Species:

  1. 2483143Human (Homo sapiens) [TaxId:9606] [316254] (10 PDB entries)
    1. Domains for 5epc:
      1. 2483150Domain d5epca1: 5epc A:1-191 [316624]
        Other proteins in same PDB: d5epca4, d5epca5, d5epcb4, d5epcb5
        automated match to d5f9ca1
        complexed with gol, mg, so4
      2. 2483151Domain d5epca2: 5epc A:192-304 [316625]
        Other proteins in same PDB: d5epca4, d5epca5, d5epcb4, d5epcb5
        automated match to d5f9ca2
        complexed with gol, mg, so4
      3. 2483152Domain d5epca3: 5epc A:305-421 [316626]
        Other proteins in same PDB: d5epca4, d5epca5, d5epcb4, d5epcb5
        automated match to d5f9ca3
        complexed with gol, mg, so4
      4. 2483153Domain d5epcb1: 5epc B:1-191 [316629]
        Other proteins in same PDB: d5epca4, d5epca5, d5epcb4, d5epcb5
        automated match to d5f9ca1
        complexed with gol, mg, so4
      5. 2483154Domain d5epcb2: 5epc B:192-304 [316630]
        Other proteins in same PDB: d5epca4, d5epca5, d5epcb4, d5epcb5
        automated match to d5f9ca2
        complexed with gol, mg, so4
      6. 2483155Domain d5epcb3: 5epc B:305-421 [316631]
        Other proteins in same PDB: d5epca4, d5epca5, d5epcb4, d5epcb5
        automated match to d5f9ca3
        complexed with gol, mg, so4
    2. Domains for 5f9c:
      1. 2483156Domain d5f9ca1: 5f9c A:1-191 [316270]
        Other proteins in same PDB: d5f9ca4, d5f9cb4
        automated match to d3pmga1
        complexed with gol, mg, so4; mutant
      2. 2483157Domain d5f9ca2: 5f9c A:192-304 [316271]
        Other proteins in same PDB: d5f9ca4, d5f9cb4
        automated match to d3pmga2
        complexed with gol, mg, so4; mutant
      3. 2483158Domain d5f9ca3: 5f9c A:305-421 [316272]
        Other proteins in same PDB: d5f9ca4, d5f9cb4
        automated match to d3pmga3
        complexed with gol, mg, so4; mutant
      4. 2483159Domain d5f9cb1: 5f9c B:2-191 [316380]
        Other proteins in same PDB: d5f9ca4, d5f9cb4
        automated match to d3pmga1
        complexed with gol, mg, so4; mutant
      5. 2483160Domain d5f9cb2: 5f9c B:192-304 [316381]
        Other proteins in same PDB: d5f9ca4, d5f9cb4
        automated match to d3pmga2
        complexed with gol, mg, so4; mutant
      6. 2483161Domain d5f9cb3: 5f9c B:305-421 [316382]
        Other proteins in same PDB: d5f9ca4, d5f9cb4
        automated match to d3pmga3
        complexed with gol, mg, so4; mutant
    3. Domains for 5hsh:
      1. 2483168Domain d5hsha1: 5hsh A:1-191 [316404]
        Other proteins in same PDB: d5hsha4, d5hshb4
        automated match to d3pmga1
        complexed with so4; mutant
      2. 2483169Domain d5hsha2: 5hsh A:192-304 [316405]
        Other proteins in same PDB: d5hsha4, d5hshb4
        automated match to d3pmga2
        complexed with so4; mutant
      3. 2483170Domain d5hsha3: 5hsh A:305-421 [316406]
        Other proteins in same PDB: d5hsha4, d5hshb4
        automated match to d3pmga3
        complexed with so4; mutant
      4. 2483171Domain d5hshb1: 5hsh B:1-191 [316297]
        Other proteins in same PDB: d5hsha4, d5hshb4
        automated match to d3pmga1
        complexed with so4; mutant
      5. 2483172Domain d5hshb2: 5hsh B:192-304 [316298]
        Other proteins in same PDB: d5hsha4, d5hshb4
        automated match to d3pmga2
        complexed with so4; mutant
      6. 2483173Domain d5hshb3: 5hsh B:305-421 [316299]
        Other proteins in same PDB: d5hsha4, d5hshb4
        automated match to d3pmga3
        complexed with so4; mutant
    4. Domains for 5jn5:
      1. 2483144Domain d5jn5a1: 5jn5 A:1-191 [329490]
        Other proteins in same PDB: d5jn5a4, d5jn5a5, d5jn5b4
        automated match to d5hshb1
        complexed with ca, so4
      2. 2483145Domain d5jn5a2: 5jn5 A:192-304 [329491]
        Other proteins in same PDB: d5jn5a4, d5jn5a5, d5jn5b4
        automated match to d5f9ca2
        complexed with ca, so4
      3. 2483146Domain d5jn5a3: 5jn5 A:305-421 [329492]
        Other proteins in same PDB: d5jn5a4, d5jn5a5, d5jn5b4
        automated match to d5f9ca3
        complexed with ca, so4
      4. 2483147Domain d5jn5b1: 5jn5 B:2-191 [329447]
        Other proteins in same PDB: d5jn5a4, d5jn5a5, d5jn5b4
        automated match to d5hshb1
        complexed with ca, so4
      5. 2483148Domain d5jn5b2: 5jn5 B:192-304 [329448]
        Other proteins in same PDB: d5jn5a4, d5jn5a5, d5jn5b4
        automated match to d5f9ca2
        complexed with ca, so4
      6. 2483149Domain d5jn5b3: 5jn5 B:305-421 [329449]
        Other proteins in same PDB: d5jn5a4, d5jn5a5, d5jn5b4
        automated match to d5f9ca3
        complexed with ca, so4
    5. Domains for 5tr2:
      1. 2483162Domain d5tr2a1: 5tr2 A:1-191 [329663]
        Other proteins in same PDB: d5tr2a4, d5tr2a5, d5tr2b4
        automated match to d5hshb1
        complexed with ca, gol, so4
      2. 2483163Domain d5tr2a2: 5tr2 A:192-304 [329664]
        Other proteins in same PDB: d5tr2a4, d5tr2a5, d5tr2b4
        automated match to d5f9ca2
        complexed with ca, gol, so4
      3. 2483164Domain d5tr2a3: 5tr2 A:305-421 [329665]
        Other proteins in same PDB: d5tr2a4, d5tr2a5, d5tr2b4
        automated match to d5f9ca3
        complexed with ca, gol, so4
      4. 2483165Domain d5tr2b1: 5tr2 B:2-191 [329558]
        Other proteins in same PDB: d5tr2a4, d5tr2a5, d5tr2b4
        automated match to d5hshb1
        complexed with ca, gol, so4
      5. 2483166Domain d5tr2b2: 5tr2 B:192-304 [329559]
        Other proteins in same PDB: d5tr2a4, d5tr2a5, d5tr2b4
        automated match to d5f9ca2
        complexed with ca, gol, so4
      6. 2483167Domain d5tr2b3: 5tr2 B:305-421 [329560]
        Other proteins in same PDB: d5tr2a4, d5tr2a5, d5tr2b4
        automated match to d5f9ca3
        complexed with ca, gol, so4
    6. Domains for 5vbi:
      1. 3053683Domain d5vbib1: 5vbi B:1-191 [353745]
        Other proteins in same PDB: d5vbia4, d5vbia5, d5vbib4
        automated match to d5jn5a1
        complexed with gol, mg, so4
      2. 3053684Domain d5vbib2: 5vbi B:192-304 [353746]
        Other proteins in same PDB: d5vbia4, d5vbia5, d5vbib4
        automated match to d5epca2
        complexed with gol, mg, so4
      3. 3053685Domain d5vbib3: 5vbi B:305-421 [353747]
        Other proteins in same PDB: d5vbia4, d5vbia5, d5vbib4
        automated match to d5jn5a3
        complexed with gol, mg, so4
      4. 3053702Domain d5vbia1: 5vbi A:1-191 [353764]
        Other proteins in same PDB: d5vbia4, d5vbia5, d5vbib4
        automated match to d5jn5a1
        complexed with gol, mg, so4
      5. 3053703Domain d5vbia2: 5vbi A:192-304 [353765]
        Other proteins in same PDB: d5vbia4, d5vbia5, d5vbib4
        automated match to d5epca2
        complexed with gol, mg, so4
      6. 3053704Domain d5vbia3: 5vbi A:305-421 [353766]
        Other proteins in same PDB: d5vbia4, d5vbia5, d5vbib4
        automated match to d5jn5a3
        complexed with gol, mg, so4
    7. Domains for 5vec:
      1. 3053915Domain d5vecb1: 5vec B:1-191 [353977]
        Other proteins in same PDB: d5veca4, d5veca5, d5vecb4, d5vecb5
        automated match to d5jn5a1
        complexed with gol, mg, so4
      2. 3053916Domain d5vecb2: 5vec B:192-304 [353978]
        Other proteins in same PDB: d5veca4, d5veca5, d5vecb4, d5vecb5
        automated match to d5epca2
        complexed with gol, mg, so4
      3. 3053917Domain d5vecb3: 5vec B:305-421 [353979]
        Other proteins in same PDB: d5veca4, d5veca5, d5vecb4, d5vecb5
        automated match to d5jn5a3
        complexed with gol, mg, so4
      4. 3054073Domain d5veca1: 5vec A:1-191 [354135]
        Other proteins in same PDB: d5veca4, d5veca5, d5vecb4, d5vecb5
        automated match to d5jn5a1
        complexed with gol, mg, so4
      5. 3054074Domain d5veca2: 5vec A:192-304 [354136]
        Other proteins in same PDB: d5veca4, d5veca5, d5vecb4, d5vecb5
        automated match to d5epca2
        complexed with gol, mg, so4
      6. 3054075Domain d5veca3: 5vec A:305-421 [354137]
        Other proteins in same PDB: d5veca4, d5veca5, d5vecb4, d5vecb5
        automated match to d5jn5a3
        complexed with gol, mg, so4
    8. Domains for 5vg7:
      1. 3053667Domain d5vg7b1: 5vg7 B:1-191 [353729]
        Other proteins in same PDB: d5vg7a4, d5vg7a5, d5vg7b4, d5vg7b5
        automated match to d5jn5a1
        complexed with gol, mg, so4
      2. 3053668Domain d5vg7b2: 5vg7 B:192-304 [353730]
        Other proteins in same PDB: d5vg7a4, d5vg7a5, d5vg7b4, d5vg7b5
        automated match to d5epca2
        complexed with gol, mg, so4
      3. 3053669Domain d5vg7b3: 5vg7 B:305-421 [353731]
        Other proteins in same PDB: d5vg7a4, d5vg7a5, d5vg7b4, d5vg7b5
        automated match to d5jn5a3
        complexed with gol, mg, so4
      4. 3053753Domain d5vg7a1: 5vg7 A:1-191 [353815]
        Other proteins in same PDB: d5vg7a4, d5vg7a5, d5vg7b4, d5vg7b5
        automated match to d5jn5a1
        complexed with gol, mg, so4
      5. 3053754Domain d5vg7a2: 5vg7 A:192-304 [353816]
        Other proteins in same PDB: d5vg7a4, d5vg7a5, d5vg7b4, d5vg7b5
        automated match to d5epca2
      6. 3053755Domain d5vg7a3: 5vg7 A:305-421 [353817]
        Other proteins in same PDB: d5vg7a4, d5vg7a5, d5vg7b4, d5vg7b5
        automated match to d5jn5a3
    9. Domains for 5vin:
      1. 3053946Domain d5vina1: 5vin A:1-191 [354008]
        Other proteins in same PDB: d5vina4, d5vina5, d5vinb4
        automated match to d5jn5a1
        complexed with co, gol, so4
      2. 3053947Domain d5vina2: 5vin A:192-304 [354009]
        Other proteins in same PDB: d5vina4, d5vina5, d5vinb4
        automated match to d5epca2
        complexed with co, gol, so4
      3. 3053948Domain d5vina3: 5vin A:305-421 [354010]
        Other proteins in same PDB: d5vina4, d5vina5, d5vinb4
        automated match to d5jn5a3
        complexed with co, gol, so4
      4. 3053952Domain d5vinb1: 5vin B:1-191 [354014]
        Other proteins in same PDB: d5vina4, d5vina5, d5vinb4
        automated match to d5jn5a1
        complexed with co, gol, so4
      5. 3053953Domain d5vinb2: 5vin B:192-304 [354015]
        Other proteins in same PDB: d5vina4, d5vina5, d5vinb4
        automated match to d5epca2
        complexed with co, gol, so4
      6. 3053954Domain d5vinb3: 5vin B:305-421 [354016]
        Other proteins in same PDB: d5vina4, d5vina5, d5vinb4
        automated match to d5jn5a3
        complexed with co, gol, so4
    10. Domains for 6bj0:
      1. 3058768Domain d6bj0a1: 6bj0 A:1-191 [358830]
        Other proteins in same PDB: d6bj0a4, d6bj0a5, d6bj0b4, d6bj0b5
        automated match to d5jn5a1
        complexed with g6p, mg
      2. 3058769Domain d6bj0a2: 6bj0 A:192-304 [358831]
        Other proteins in same PDB: d6bj0a4, d6bj0a5, d6bj0b4, d6bj0b5
        automated match to d5epca2
        complexed with g6p, mg
      3. 3058770Domain d6bj0a3: 6bj0 A:305-421 [358832]
        Other proteins in same PDB: d6bj0a4, d6bj0a5, d6bj0b4, d6bj0b5
        automated match to d5jn5a3
        complexed with g6p, mg
      4. 3058797Domain d6bj0b1: 6bj0 B:1-191 [358859]
        Other proteins in same PDB: d6bj0a4, d6bj0a5, d6bj0b4, d6bj0b5
        automated match to d5jn5a1
        complexed with g6p, mg
      5. 3058798Domain d6bj0b2: 6bj0 B:192-304 [358860]
        Other proteins in same PDB: d6bj0a4, d6bj0a5, d6bj0b4, d6bj0b5
        automated match to d5epca2
        complexed with g6p, mg
      6. 3058800Domain d6bj0b3: 6bj0 B:305-421 [358862]
        Other proteins in same PDB: d6bj0a4, d6bj0a5, d6bj0b4, d6bj0b5
        automated match to d5jn5a3
        complexed with g6p, mg
  2. 2483174Pseudomonas aeruginosa [TaxId:287] [256063] (1 PDB entry)
  3. 2483178Pseudomonas aeruginosa, PA01 [TaxId:208964] [256304] (2 PDB entries)
    1. Domains for 4il8:
      1. 2483182Domain d4il8a1: 4il8 A:5-154 [252640]
        Other proteins in same PDB: d4il8a4
        automated match to d1k2yx1
        complexed with gol, mg; mutant
      2. 2483183Domain d4il8a2: 4il8 A:155-258 [252641]
        Other proteins in same PDB: d4il8a4
        automated match to d1p5dx2
        complexed with gol, mg; mutant
      3. 2483184Domain d4il8a3: 4il8 A:259-367 [252642]
        Other proteins in same PDB: d4il8a4
        automated match to d1p5dx3
        complexed with gol, mg; mutant
    2. Domains for 4mrq:
      1. 2483179Domain d4mrqa1: 4mrq A:9-154 [253827]
        Other proteins in same PDB: d4mrqa4
        automated match to d1k2yx1
        complexed with edo, peg, pge, tla, zn
      2. 2483180Domain d4mrqa2: 4mrq A:155-258 [253828]
        Other proteins in same PDB: d4mrqa4
        automated match to d1p5dx2
        complexed with edo, peg, pge, tla, zn
      3. 2483181Domain d4mrqa3: 4mrq A:259-367 [253829]
        Other proteins in same PDB: d4mrqa4
        automated match to d1p5dx3
        complexed with edo, peg, pge, tla, zn

More info for Protein automated matches from c.84.1.0: automated matches

Timeline for Protein automated matches from c.84.1.0: automated matches: