Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1510239Class b: All beta proteins [48724] (176 folds)
  3. 1510240Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1525171Superfamily b.1.30: Zn aminopeptidase insert domain [254133] (2 families) (S)
    same topology as (b.1.15.1)
  5. 1525190Family b.1.30.0: automated matches [254306] (1 protein)
    not a true family
  6. 1525191Protein automated matches [254707] (3 species)
    not a true protein

Species:

  1. 1525192Human (Homo sapiens) [TaxId:9606] [255965] (6 PDB entries)
    1. Domains for 3mdj:
      1. 1525194Domain d3mdja3: 3mdj A:530-614 [247646]
        Other proteins in same PDB: d3mdja1, d3mdja2, d3mdja4, d3mdjb1, d3mdjb2, d3mdjb4, d3mdjc1, d3mdjc2, d3mdjc4
        automated match to d2yd0a3
        complexed with bes, nag, zn
      2. 1525195Domain d3mdjb3: 3mdj B:530-614 [247650]
        Other proteins in same PDB: d3mdja1, d3mdja2, d3mdja4, d3mdjb1, d3mdjb2, d3mdjb4, d3mdjc1, d3mdjc2, d3mdjc4
        automated match to d2yd0a3
        complexed with bes, nag, zn
      3. 1525196Domain d3mdjc3: 3mdj C:530-614 [247654]
        Other proteins in same PDB: d3mdja1, d3mdja2, d3mdja4, d3mdjb1, d3mdjb2, d3mdjb4, d3mdjc1, d3mdjc2, d3mdjc4
        automated match to d2yd0a3
        complexed with bes, nag, zn
    2. Domains for 3qnf:
      1. 1525197Domain d3qnfa3: 3qnf A:530-614 [248933]
        Other proteins in same PDB: d3qnfa1, d3qnfa2, d3qnfb1, d3qnfb2, d3qnfb4, d3qnfc1, d3qnfc2, d3qnfc4
        automated match to d2yd0a3
        complexed with nag, zn
      2. 1525198Domain d3qnfb3: 3qnf B:530-614 [248936]
        Other proteins in same PDB: d3qnfa1, d3qnfa2, d3qnfb1, d3qnfb2, d3qnfb4, d3qnfc1, d3qnfc2, d3qnfc4
        automated match to d2yd0a3
        complexed with nag, zn
      3. 1525199Domain d3qnfc3: 3qnf C:530-614 [248940]
        Other proteins in same PDB: d3qnfa1, d3qnfa2, d3qnfb1, d3qnfb2, d3qnfb4, d3qnfc1, d3qnfc2, d3qnfc4
        automated match to d2yd0a3
        complexed with nag, zn
    3. Domain for 3rjo:
    4. Domains for 3se6:
      1. 1525200Domain d3se6a3: 3se6 A:547-637 [249387]
        Other proteins in same PDB: d3se6a1, d3se6a2, d3se6a4, d3se6b1, d3se6b2, d3se6b4
        automated match to d2yd0a3
        complexed with lys, mes, nag, zn
      2. 1525201Domain d3se6b3: 3se6 B:547-637 [249391]
        Other proteins in same PDB: d3se6a1, d3se6a2, d3se6a4, d3se6b1, d3se6b2, d3se6b4
        automated match to d2yd0a3
        complexed with lys, mes, nag, zn
    5. Domains for 4jbs:
      1. 1525202Domain d4jbsa3: 4jbs A:547-637 [252874]
        Other proteins in same PDB: d4jbsa1, d4jbsa2, d4jbsa4, d4jbsb1, d4jbsb2, d4jbsb4
        automated match to d2yd0a3
        complexed with imd, nag, p52, zn
      2. 1525203Domain d4jbsb3: 4jbs B:547-637 [252878]
        Other proteins in same PDB: d4jbsa1, d4jbsa2, d4jbsa4, d4jbsb1, d4jbsb2, d4jbsb4
        automated match to d2yd0a3
        complexed with imd, nag, p52, zn
    6. Domain for 4p8q:
  2. 1525205Neisseria meningitidis [TaxId:122586] [259503] (1 PDB entry)
  3. 1525207Thermoplasma acidophilum [TaxId:273075] [256034] (1 PDB entry)

More info for Protein automated matches from b.1.30.0: automated matches

Timeline for Protein automated matches from b.1.30.0: automated matches: