Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1811467Fold b.98: Zn aminopeptidase N-terminal domain [63736] (1 superfamily)
    duplication: two beta-sandwiches of similar topologies are fused together in a single three beta-sheet domain
  4. 1811468Superfamily b.98.1: Zn aminopeptidase N-terminal domain [63737] (2 families) (S)
  5. 1811535Family b.98.1.0: automated matches [254305] (1 protein)
    not a true family
  6. 1811536Protein automated matches [254706] (4 species)
    not a true protein

Species:

  1. 1811537African clawed frog (Xenopus laevis) [TaxId:8355] [256266] (1 PDB entry)
  2. 1811540Human (Homo sapiens) [TaxId:9606] [255964] (11 PDB entries)
    1. Domains for 3mdj:
      1. 1811545Domain d3mdja1: 3mdj A:46-254 [247644]
        Other proteins in same PDB: d3mdja2, d3mdja3, d3mdja4, d3mdjb2, d3mdjb3, d3mdjb4, d3mdjc2, d3mdjc3, d3mdjc4
        automated match to d2yd0a1
        complexed with bes, nag, zn
      2. 1811546Domain d3mdjb1: 3mdj B:46-254 [247648]
        Other proteins in same PDB: d3mdja2, d3mdja3, d3mdja4, d3mdjb2, d3mdjb3, d3mdjb4, d3mdjc2, d3mdjc3, d3mdjc4
        automated match to d2yd0a1
        complexed with bes, nag, zn
      3. 1811547Domain d3mdjc1: 3mdj C:46-254 [247652]
        Other proteins in same PDB: d3mdja2, d3mdja3, d3mdja4, d3mdjb2, d3mdjb3, d3mdjb4, d3mdjc2, d3mdjc3, d3mdjc4
        automated match to d2yd0a1
        complexed with bes, nag, zn
    2. Domains for 3qnf:
      1. 1811548Domain d3qnfa1: 3qnf A:46-254 [248931]
        Other proteins in same PDB: d3qnfa2, d3qnfa3, d3qnfb2, d3qnfb3, d3qnfb4, d3qnfc2, d3qnfc3, d3qnfc4
        automated match to d2yd0a1
        complexed with nag, zn
      2. 1811549Domain d3qnfb1: 3qnf B:46-254 [248934]
        Other proteins in same PDB: d3qnfa2, d3qnfa3, d3qnfb2, d3qnfb3, d3qnfb4, d3qnfc2, d3qnfc3, d3qnfc4
        automated match to d2yd0a1
        complexed with nag, zn
      3. 1811550Domain d3qnfc1: 3qnf C:47-254 [248938]
        Other proteins in same PDB: d3qnfa2, d3qnfa3, d3qnfb2, d3qnfb3, d3qnfb4, d3qnfc2, d3qnfc3, d3qnfc4
        automated match to d2yd0a1
        complexed with nag, zn
    3. Domains for 3se6:
      1. 1811551Domain d3se6a1: 3se6 A:54-271 [249385]
        Other proteins in same PDB: d3se6a2, d3se6a3, d3se6a4, d3se6b2, d3se6b3, d3se6b4
        automated match to d2yd0a1
        complexed with lys, mes, nag, zn
      2. 1811552Domain d3se6b1: 3se6 B:55-271 [249389]
        Other proteins in same PDB: d3se6a2, d3se6a3, d3se6a4, d3se6b2, d3se6b3, d3se6b4
        automated match to d2yd0a1
        complexed with lys, mes, nag, zn
    4. Domain for 4fyq:
    5. Domain for 4fyr:
    6. Domain for 4fyt:
    7. Domains for 4jbs:
      1. 1811555Domain d4jbsa1: 4jbs A:54-271 [252872]
        Other proteins in same PDB: d4jbsa2, d4jbsa3, d4jbsa4, d4jbsb2, d4jbsb3, d4jbsb4
        automated match to d2yd0a1
        complexed with imd, nag, p52, zn
      2. 1811556Domain d4jbsb1: 4jbs B:55-271 [252876]
        Other proteins in same PDB: d4jbsa2, d4jbsa3, d4jbsa4, d4jbsb2, d4jbsb3, d4jbsb4
        automated match to d2yd0a1
        complexed with imd, nag, p52, zn
    8. Domains for 4p8q:
      1. 1811557Domain d4p8qa1: 4p8q A:159-366 [261381]
        Other proteins in same PDB: d4p8qa2, d4p8qa3, d4p8qa4, d4p8qb2, d4p8qb3, d4p8qb4
        automated match to d3se6a1
        complexed with nag, unl, zn
      2. 1811558Domain d4p8qb1: 4p8q B:160-366 [263456]
        Other proteins in same PDB: d4p8qa2, d4p8qa3, d4p8qa4, d4p8qb2, d4p8qb3, d4p8qb4
        automated match to d4p8qa1
        complexed with nag, unl, zn
    9. Domains for 4pj6:
      1. 1811553Domain d4pj6a1: 4pj6 A:159-366 [267174]
        Other proteins in same PDB: d4pj6a2, d4pj6a3, d4pj6a4, d4pj6b2, d4pj6b3, d4pj6b4
        automated match to d4p8qa1
        complexed with lys, nag, zn
      2. 1811554Domain d4pj6b1: 4pj6 B:160-366 [267178]
        Other proteins in same PDB: d4pj6a2, d4pj6a3, d4pj6a4, d4pj6b2, d4pj6b3, d4pj6b4
        automated match to d4p8qa1
        complexed with lys, nag, zn
    10. Domain for 5aen:
    11. Domains for 5cu5:
      1. 1811559Domain d5cu5a1: 5cu5 A:54-271 [277106]
        Other proteins in same PDB: d5cu5a2, d5cu5a3, d5cu5a4, d5cu5b2, d5cu5b3, d5cu5b4
        automated match to d3se6a1
        complexed with man, nag
      2. 1811560Domain d5cu5b1: 5cu5 B:55-271 [277110]
        Other proteins in same PDB: d5cu5a2, d5cu5a3, d5cu5a4, d5cu5b2, d5cu5b3, d5cu5b4
        automated match to d3se6a1
        complexed with man, nag
  3. 1811561Neisseria meningitidis [TaxId:122586] [259498] (1 PDB entry)
  4. 1811563Thermoplasma acidophilum [TaxId:273075] [256032] (1 PDB entry)

More info for Protein automated matches from b.98.1.0: automated matches

Timeline for Protein automated matches from b.98.1.0: automated matches: