Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2706693Fold a.29: Bromodomain-like [47363] (15 superfamilies)
    4 helices; bundle; minor mirror variant of up-and-down topology
  4. 2708905Superfamily a.29.12: Nqo1C-terminal domain-like [140490] (2 families) (S)
    contains extra C-terminal helix that caps the bundle at one end and Fe4-S4 cluster at the other end
  5. 2708913Family a.29.12.0: automated matches [254298] (1 protein)
    not a true family
  6. 2708914Protein automated matches [254684] (5 species)
    not a true protein

Species:

  1. 2708915Mouse (Mus musculus) [TaxId:10090] [394206] (4 PDB entries)
    1. Domain for 6zr2:
    2. Domain for 6ztq:
    3. Domain for 7ak5:
    4. Domain for 7b93:
  2. 2708920Sheep (Ovis aries) [TaxId:9940] [420086] (15 PDB entries)
    1. Domain for 6zk9:
    2. Domain for 6zkc:
    3. Domain for 6zkd:
    4. Domain for 6zke:
    5. Domain for 6zkf:
    6. Domain for 6zkh:
    7. Domain for 6zki:
    8. Domain for 6zkj:
    9. Domain for 6zkl:
    10. Domain for 6zkm:
    11. Domain for 6zkn:
    12. Domain for 6zks:
    13. Domain for 6zkt:
    14. Domain for 6zku:
    15. Domain for 6zkv:
  3. 2708936Thermus thermophilus HB8 [TaxId:300852] [255882] (3 PDB entries)
    1. Domains for 3i9v:
      1. 2708939Domain d3i9v13: 3i9v 1:334-438 [246753]
        Other proteins in same PDB: d3i9v11, d3i9v12, d3i9v2_, d3i9v31, d3i9v32, d3i9v33, d3i9v34, d3i9v4_, d3i9v5_, d3i9v6_, d3i9v7_, d3i9v9_, d3i9va1, d3i9va2, d3i9vb_, d3i9vc1, d3i9vc2, d3i9vc3, d3i9vc4, d3i9vd_, d3i9ve_, d3i9vf_, d3i9vg_, d3i9vh_
        automated match to d2fug11
        complexed with ca, fes, fmn, mn, sf4
      2. 2708940Domain d3i9va3: 3i9v A:334-438 [246766]
        Other proteins in same PDB: d3i9v11, d3i9v12, d3i9v2_, d3i9v31, d3i9v32, d3i9v33, d3i9v34, d3i9v4_, d3i9v5_, d3i9v6_, d3i9v7_, d3i9v9_, d3i9va1, d3i9va2, d3i9vb_, d3i9vc1, d3i9vc2, d3i9vc3, d3i9vc4, d3i9vd_, d3i9ve_, d3i9vf_, d3i9vg_, d3i9vh_
        automated match to d2fug11
        complexed with ca, fes, fmn, mn, sf4
    2. Domains for 3iam:
      1. 2708937Domain d3iam13: 3iam 1:334-438 [246779]
        Other proteins in same PDB: d3iam11, d3iam12, d3iam2_, d3iam31, d3iam32, d3iam33, d3iam34, d3iam4_, d3iam5_, d3iam6_, d3iam7_, d3iam9_, d3iama1, d3iama2, d3iamb_, d3iamc1, d3iamc2, d3iamc3, d3iamc4, d3iamd_, d3iame_, d3iamf_, d3iamg_, d3iamh_
        automated match to d2fug11
        complexed with ca, fes, fmn, mg, nai, sf4
      2. 2708938Domain d3iama3: 3iam A:334-438 [246792]
        Other proteins in same PDB: d3iam11, d3iam12, d3iam2_, d3iam31, d3iam32, d3iam33, d3iam34, d3iam4_, d3iam5_, d3iam6_, d3iam7_, d3iam9_, d3iama1, d3iama2, d3iamb_, d3iamc1, d3iamc2, d3iamc3, d3iamc4, d3iamd_, d3iame_, d3iamf_, d3iamg_, d3iamh_
        automated match to d2fug11
        complexed with ca, fes, fmn, mg, nai, sf4
    3. Domains for 3ias:
      1. 2708941Domain d3ias13: 3ias 1:334-438 [246845]
        Other proteins in same PDB: d3ias11, d3ias12, d3ias2_, d3ias31, d3ias32, d3ias33, d3ias34, d3ias4_, d3ias5_, d3ias6_, d3ias7_, d3ias9_, d3iasa1, d3iasa2, d3iasb_, d3iasc1, d3iasc2, d3iasc3, d3iasc4, d3iasd_, d3iase_, d3iasf_, d3iasg_, d3iash_, d3iasj1, d3iasj2, d3iask_, d3iasl1, d3iasl2, d3iasl3, d3iasl4, d3iasm_, d3iasn_, d3iaso_, d3iasp_, d3iasq_, d3iass1, d3iass2, d3iast_, d3iasu1, d3iasu2, d3iasu3, d3iasu4, d3iasv_, d3iasw_, d3iasx_, d3iasy_, d3iasz_
        automated match to d2fug11
        complexed with ca, fes, fmn, sf4
      2. 2708942Domain d3iasa3: 3ias A:334-438 [246858]
        Other proteins in same PDB: d3ias11, d3ias12, d3ias2_, d3ias31, d3ias32, d3ias33, d3ias34, d3ias4_, d3ias5_, d3ias6_, d3ias7_, d3ias9_, d3iasa1, d3iasa2, d3iasb_, d3iasc1, d3iasc2, d3iasc3, d3iasc4, d3iasd_, d3iase_, d3iasf_, d3iasg_, d3iash_, d3iasj1, d3iasj2, d3iask_, d3iasl1, d3iasl2, d3iasl3, d3iasl4, d3iasm_, d3iasn_, d3iaso_, d3iasp_, d3iasq_, d3iass1, d3iass2, d3iast_, d3iasu1, d3iasu2, d3iasu3, d3iasu4, d3iasv_, d3iasw_, d3iasx_, d3iasy_, d3iasz_
        automated match to d2fug11
        complexed with ca, fes, fmn, sf4
      3. 2708943Domain d3iasj3: 3ias J:334-438 [246871]
        Other proteins in same PDB: d3ias11, d3ias12, d3ias2_, d3ias31, d3ias32, d3ias33, d3ias34, d3ias4_, d3ias5_, d3ias6_, d3ias7_, d3ias9_, d3iasa1, d3iasa2, d3iasb_, d3iasc1, d3iasc2, d3iasc3, d3iasc4, d3iasd_, d3iase_, d3iasf_, d3iasg_, d3iash_, d3iasj1, d3iasj2, d3iask_, d3iasl1, d3iasl2, d3iasl3, d3iasl4, d3iasm_, d3iasn_, d3iaso_, d3iasp_, d3iasq_, d3iass1, d3iass2, d3iast_, d3iasu1, d3iasu2, d3iasu3, d3iasu4, d3iasv_, d3iasw_, d3iasx_, d3iasy_, d3iasz_
        automated match to d2fug11
        complexed with ca, fes, fmn, sf4
      4. 2708944Domain d3iass3: 3ias S:334-438 [246884]
        Other proteins in same PDB: d3ias11, d3ias12, d3ias2_, d3ias31, d3ias32, d3ias33, d3ias34, d3ias4_, d3ias5_, d3ias6_, d3ias7_, d3ias9_, d3iasa1, d3iasa2, d3iasb_, d3iasc1, d3iasc2, d3iasc3, d3iasc4, d3iasd_, d3iase_, d3iasf_, d3iasg_, d3iash_, d3iasj1, d3iasj2, d3iask_, d3iasl1, d3iasl2, d3iasl3, d3iasl4, d3iasm_, d3iasn_, d3iaso_, d3iasp_, d3iasq_, d3iass1, d3iass2, d3iast_, d3iasu1, d3iasu2, d3iasu3, d3iasu4, d3iasv_, d3iasw_, d3iasx_, d3iasy_, d3iasz_
        automated match to d2fug11
        complexed with ca, fes, fmn, sf4
  4. 2708945Thermus thermophilus [TaxId:274] [393514] (1 PDB entry)
  5. 3086126Sus scrofa [TaxId:9823] [422443] (3 PDB entries)
    1. Domain for 7v30:
    2. Domain for 7vwj:
    3. Domain for 7vz1:

More info for Protein automated matches from a.29.12.0: automated matches

Timeline for Protein automated matches from a.29.12.0: automated matches: