Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1997771Fold a.46: Methionine synthase domain-like [47643] (3 superfamilies)
    4 helices; bundle, left-handed twist; right-handed superhelix
  4. 1997782Superfamily a.46.2: Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain [47648] (2 families) (S)
    automatically mapped to Pfam PF02885
  5. 1997842Family a.46.2.0: automated matches [254276] (1 protein)
    not a true family
  6. 1997843Protein automated matches [254641] (5 species)
    not a true protein

Species:

  1. 1997844Human (Homo sapiens) [TaxId:9606] [255652] (2 PDB entries)
    1. Domains for 2wk5:
      1. 1997847Domain d2wk5a1: 2wk5 A:32-100 [244152]
        Other proteins in same PDB: d2wk5a2, d2wk5a3, d2wk5b2, d2wk5b3, d2wk5c2, d2wk5c3, d2wk5d2, d2wk5d3
        automated match to d1uoua1
        complexed with gol
      2. 1997848Domain d2wk5b1: 2wk5 B:32-100 [244155]
        Other proteins in same PDB: d2wk5a2, d2wk5a3, d2wk5b2, d2wk5b3, d2wk5c2, d2wk5c3, d2wk5d2, d2wk5d3
        automated match to d1uoua1
        complexed with gol
      3. 1997849Domain d2wk5c1: 2wk5 C:33-100 [244158]
        Other proteins in same PDB: d2wk5a2, d2wk5a3, d2wk5b2, d2wk5b3, d2wk5c2, d2wk5c3, d2wk5d2, d2wk5d3
        automated match to d1uoua1
        complexed with gol
      4. 1997850Domain d2wk5d1: 2wk5 D:34-100 [244161]
        Other proteins in same PDB: d2wk5a2, d2wk5a3, d2wk5b2, d2wk5b3, d2wk5c2, d2wk5c3, d2wk5d2, d2wk5d3
        automated match to d1uoua1
        complexed with gol
    2. Domains for 2wk6:
      1. 1997845Domain d2wk6a1: 2wk6 A:35-100 [244164]
        Other proteins in same PDB: d2wk6a2, d2wk6a3, d2wk6b2, d2wk6b3
        automated match to d1uoua1
        complexed with iur
      2. 1997846Domain d2wk6b1: 2wk6 B:35-100 [244167]
        Other proteins in same PDB: d2wk6a2, d2wk6a3, d2wk6b2, d2wk6b3
        automated match to d1uoua1
        complexed with iur
  2. 1997851Salmonella typhimurium [TaxId:99287] [311465] (3 PDB entries)
    1. Domains for 4x46:
      1. 1997852Domain d4x46a1: 4x46 A:1-70 [309956]
        Other proteins in same PDB: d4x46a2, d4x46a3, d4x46b2, d4x46b3
        automated match to d4eada1
        complexed with edo, so4
      2. 1997853Domain d4x46b1: 4x46 B:1-70 [309959]
        Other proteins in same PDB: d4x46a2, d4x46a3, d4x46b2, d4x46b3
        automated match to d4eada1
        complexed with edo, so4
    2. Domains for 4yyy:
      1. 2268898Domain d4yyyb1: 4yyy B:1-70 [312204]
        Other proteins in same PDB: d4yyya2, d4yyya3, d4yyyb2, d4yyyb3
        automated match to d4x46b1
        complexed with cit, pge, uri
      2. 2268974Domain d4yyya1: 4yyy A:1-70 [312280]
        Other proteins in same PDB: d4yyya2, d4yyya3, d4yyyb2, d4yyyb3
        automated match to d4x46b1
        complexed with cit, pge, uri
    3. Domains for 5ey3:
      1. 2283576Domain d5ey3a1: 5ey3 A:1-70 [326877]
        Other proteins in same PDB: d5ey3a2, d5ey3a3, d5ey3a4, d5ey3b2, d5ey3b3
        automated match to d4x46b1
        complexed with ctn, edo, gol, so4
      2. 2283582Domain d5ey3b1: 5ey3 B:1-70 [326883]
        Other proteins in same PDB: d5ey3a2, d5ey3a3, d5ey3a4, d5ey3b2, d5ey3b3
        automated match to d4x46b1
        complexed with ctn, edo, gol, so4
  3. 1997854Staphylococcus aureus [TaxId:93062] [255858] (1 PDB entry)
  4. 2268376Salmonella enterica [TaxId:90371] [311682] (2 PDB entries)
    1. Domains for 4xr5:
      1. 2268377Domain d4xr5b1: 4xr5 B:1-70 [311683]
        Other proteins in same PDB: d4xr5a2, d4xr5a3, d4xr5b2, d4xr5b3
        automated match to d4x46b1
        complexed with cl, peg, pge
      2. 2268586Domain d4xr5a1: 4xr5 A:1-70 [311892]
        Other proteins in same PDB: d4xr5a2, d4xr5a3, d4xr5b2, d4xr5b3
        automated match to d4x46b1
        complexed with cl, peg, pge
    2. Domains for 4yek:
      1. 2268668Domain d4yekb1: 4yek B:1-70 [311974]
        Other proteins in same PDB: d4yeka2, d4yeka3, d4yekb2, d4yekb3
        automated match to d4x46b1
        complexed with edo, gol, pge, so4, thm
      2. 2268684Domain d4yeka1: 4yek A:1-70 [311990]
        Other proteins in same PDB: d4yeka2, d4yeka3, d4yekb2, d4yekb3
        automated match to d4x46b1
        complexed with edo, gol, pge, so4, thm
  5. 2283090Bacillus subtilis [TaxId:224308] [326391] (1 PDB entry)

More info for Protein automated matches from a.46.2.0: automated matches

Timeline for Protein automated matches from a.46.2.0: automated matches: