Class d: Alpha and beta proteins (a+b) [53931] (388 folds) |
Fold d.218: Nucleotidyltransferase [81302] (1 superfamily) core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123 |
Superfamily d.218.1: Nucleotidyltransferase [81301] (16 families) |
Family d.218.1.2: DNA polymerase beta-like [81300] (5 proteins) insert X in the core is an alpha-beta(2) unit; mixed 5-stranded sheet, order: 12543; contains extra C-terminal alpha+beta subdomain |
Protein automated matches [254484] (3 species) not a true protein |
Domain d2bcra3: 2bcr A:386-575 [128309] Other proteins in same PDB: d2bcra1, d2bcra2 automated match to d2bcqa3 protein/DNA complex; complexed with edo, mg, na, ppv |
Domain d2bcsa3: 2bcs A:386-575 [128312] Other proteins in same PDB: d2bcsa1, d2bcsa2 automated match to d2bcva3 protein/DNA complex; complexed with mg, na, ppv |
Domain d2bcua3: 2bcu A:386-575 [128315] Other proteins in same PDB: d2bcua1, d2bcua2 automated match to d2bcva3 protein/DNA complex; complexed with na, ppv |
Domain d2bcva3: 2bcv A:386-575 [128318] Other proteins in same PDB: d2bcva1, d2bcva2 automated match to d2bcva3 protein/DNA complex; complexed with mg, na, ttp |
Mouse (Mus musculus) [TaxId:10090] [256295] (30 PDB entries) |
Domain d4i27a3: 4i27 A:303-510 [252548] Other proteins in same PDB: d4i27a1, d4i27a2 automated match to d1jmsa4 protein/DNA complex; complexed with d3t, mg, na |
Domain d4i28a3: 4i28 A:303-510 [252551] Other proteins in same PDB: d4i28a1, d4i28a2 automated match to d1jmsa4 protein/DNA complex; complexed with mg, na, zn |
Domain d4i29a3: 4i29 A:303-509 [252554] Other proteins in same PDB: d4i29a1, d4i29a2 automated match to d1jmsa4 protein/DNA complex; complexed with mn, na |
Domain d4i2aa3: 4i2a A:303-510 [252557] Other proteins in same PDB: d4i2aa1, d4i2aa2 automated match to d1jmsa4 protein/DNA complex; complexed with mg, na |
Domain d4i2ba3: 4i2b A:303-510 [252560] Other proteins in same PDB: d4i2ba1, d4i2ba2 automated match to d1jmsa4 protein/DNA complex; complexed with apc, mg, na |
Domain d4i2ca3: 4i2c A:303-510 [252563] Other proteins in same PDB: d4i2ca1, d4i2ca2 automated match to d1jmsa4 protein/DNA complex; complexed with apc, mn, na |
Domain d4i2da3: 4i2d A:303-510 [252566] Other proteins in same PDB: d4i2da1, d4i2da2 automated match to d1jmsa4 complexed with apc, mg, na, zn |
Domain d4i2ea3: 4i2e A:303-510 [252569] Other proteins in same PDB: d4i2ea1, d4i2ea2 automated match to d1jmsa4 protein/DNA complex; complexed with apc, co, na |
Domain d4i2fa3: 4i2f A:303-510 [252572] Other proteins in same PDB: d4i2fa1, d4i2fa2 automated match to d1jmsa4 protein/DNA complex; complexed with mg, na, zn |
Domain d4i2ga3: 4i2g A:303-510 [252575] Other proteins in same PDB: d4i2ga1, d4i2ga2 automated match to d1jmsa4 protein/DNA complex; complexed with co, mg, na |
Domain d4i2ha3: 4i2h A:303-510 [252578] Other proteins in same PDB: d4i2ha1, d4i2ha2 automated match to d1jmsa4 protein/DNA complex; complexed with apc, mg, na, zn |
Domain d4i2ia3: 4i2i A:303-510 [252581] Other proteins in same PDB: d4i2ia1, d4i2ia2 automated match to d1jmsa4 complexed with ap5, mg, zn |
Domain d4i2ja3: 4i2j A:303-510 [252584] Other proteins in same PDB: d4i2ja1, d4i2ja2 automated match to d1jmsa4 complexed with dcp, zn |
Domain d4iqta3: 4iqt A:303-510 [252674] Other proteins in same PDB: d4iqta1, d4iqta2 automated match to d1jmsa4 complexed with 1fo |
Domain d4iqua3: 4iqu A:303-510 [252677] Other proteins in same PDB: d4iqua1, d4iqua2 automated match to d1jmsa4 complexed with 1fq, na |
Domain d4iqva3: 4iqv A:303-510 [252680] Other proteins in same PDB: d4iqva1, d4iqva2 automated match to d1jmsa4 protein/DNA complex; complexed with 1fo, na |
Domain d4iqwa3: 4iqw A:303-510 [252683] Other proteins in same PDB: d4iqwa1, d4iqwa2 automated match to d1jmsa4 protein/DNA complex; complexed with 1fq, na |
Domain d4qz8a3: 4qz8 A:303-510 [273688] Other proteins in same PDB: d4qz8a1, d4qz8a2 automated match to d1jmsa4 protein/DNA complex; complexed with dct, mg, na |
Domain d4qz9a3: 4qz9 A:303-510 [273691] Other proteins in same PDB: d4qz9a1, d4qz9a2 automated match to d1jmsa4 protein/DNA complex; complexed with dct, mg, na |
Domain d4qzaa3: 4qza A:303-510 [273695] Other proteins in same PDB: d4qzaa1, d4qzaa2 automated match to d1jmsa4 protein/DNA complex; complexed with dct, mg, na |
Domain d4qzba3: 4qzb A:303-510 [273697] Other proteins in same PDB: d4qzba1, d4qzba2 automated match to d1jmsa4 protein/DNA complex; complexed with dct, mg, na |
Domain d4qzca3: 4qzc A:303-510 [273700] Other proteins in same PDB: d4qzca1, d4qzca2 automated match to d1jmsa4 protein/DNA complex; complexed with dct, mg, na; mutant |
Domain d4qzda3: 4qzd A:303-510 [273703] Other proteins in same PDB: d4qzda1, d4qzda2 automated match to d1jmsa4 protein/DNA complex; complexed with dct, mg, na; mutant |
Domain d4qzea3: 4qze A:303-510 [273715] Other proteins in same PDB: d4qzea1, d4qzea2 automated match to d1jmsa4 protein/DNA complex; complexed with dct, mg, na; mutant |
Domain d4qzfa3: 4qzf A:303-510 [273706] Other proteins in same PDB: d4qzfa1, d4qzfa2 automated match to d1jmsa4 protein/DNA complex; complexed with dct, mg, na; mutant |
Domain d4qzga3: 4qzg A:303-510 [273709] Other proteins in same PDB: d4qzga1, d4qzga2 automated match to d1jmsa4 protein/DNA complex; complexed with dct, mg, na; mutant |
Domain d4qzha3: 4qzh A:303-510 [273712] Other proteins in same PDB: d4qzha1, d4qzha2 automated match to d1jmsa4 protein/DNA complex; complexed with dct, mg, na; mutant |
Domain d4qzia3: 4qzi A:303-510 [273718] Other proteins in same PDB: d4qzia1, d4qzia2 automated match to d1jmsa4 protein/DNA complex; complexed with dct, mg, na, zn; mutant |
Domain d6go3a3: 6go3 A:303-510 [369899] Other proteins in same PDB: d6go3a1, d6go3a2 automated match to d1jmsa4 |
Domain d6go4a3: 6go4 A:303-511 [369896] Other proteins in same PDB: d6go4a1, d6go4a2 automated match to d1jmsa4 protein/DNA complex; complexed with dct, mg, na |
Norway rat (Rattus norvegicus) [TaxId:10116] [255608] (2 PDB entries) |
Domain d1cf6a5: 1cf6 A:149-334 [302274] Other proteins in same PDB: d1cf6a3, d1cf6a4, d1cf6b3, d1cf6b4 automated match to d4klia3 protein/DNA complex; complexed with cr, ucp |
Domain d1cf6b5: 1cf6 B:149-334 [302277] Other proteins in same PDB: d1cf6a3, d1cf6a4, d1cf6b3, d1cf6b4 automated match to d4klia3 protein/DNA complex; complexed with cr, ucp |
Domain d2vana2: 2van A:149-335 [152827] Other proteins in same PDB: d2vana1 automated match to d1zqwa2 |
Timeline for Protein automated matches from d.218.1.2: DNA polymerase beta-like: