Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2715427Fold a.60: SAM domain-like [47768] (17 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 2716398Superfamily a.60.12: PsbU/PolX domain-like [81585] (3 families) (S)
    contains one classic and one pseudo HhH motifs
  5. 2716677Family a.60.12.0: automated matches [254215] (1 protein)
    not a true family
  6. 2716678Protein automated matches [254483] (3 species)
    not a true protein

Species:

  1. 2716679Human (Homo sapiens) [TaxId:9606] [255047] (17 PDB entries)
    1. Domain for 2bcr:
    2. Domain for 2bcs:
    3. Domain for 2bcu:
    4. Domain for 2bcv:
    5. Domain for 4lzd:
    6. Domain for 5zlc:
    7. Domain for 6aec:
    8. Domain for 6aeh:
    9. Domain for 6ak5:
    10. Domain for 6ak6:
    11. Domain for 6iph:
    12. Domain for 6ipi:
    13. Domain for 6ipj:
    14. Domain for 6ipk:
    15. Domain for 6ipl:
    16. Domain for 6ipm:
    17. Domain for 6ipn:
  2. 2716697Mouse (Mus musculus) [TaxId:10090] [255237] (31 PDB entries)
    1. Domains for 2ihm:
      1. 2716713Domain d2ihma2: 2ihm A:231-289 [242124]
        Other proteins in same PDB: d2ihma1, d2ihma3, d2ihmb1, d2ihmb3
        automated match to d1jmsa3
        protein/DNA complex; complexed with d3t, mg, na
      2. 2716714Domain d2ihmb2: 2ihm B:231-289 [242127]
        Other proteins in same PDB: d2ihma1, d2ihma3, d2ihmb1, d2ihmb3
        automated match to d1jmsa3
        protein/DNA complex; complexed with d3t, mg, na
    2. Domain for 4i27:
    3. Domain for 4i28:
    4. Domain for 4i29:
    5. Domain for 4i2a:
    6. Domain for 4i2b:
    7. Domain for 4i2c:
    8. Domain for 4i2d:
    9. Domain for 4i2e:
    10. Domain for 4i2f:
    11. Domain for 4i2g:
    12. Domain for 4i2h:
    13. Domain for 4i2i:
    14. Domain for 4i2j:
    15. Domain for 4iqt:
    16. Domain for 4iqu:
    17. Domain for 4iqv:
    18. Domain for 4iqw:
    19. Domain for 4qz8:
    20. Domain for 4qz9:
    21. Domain for 4qza:
    22. Domain for 4qzb:
    23. Domain for 4qzc:
    24. Domain for 4qzd:
    25. Domain for 4qze:
    26. Domain for 4qzf:
    27. Domain for 4qzg:
    28. Domain for 4qzh:
    29. Domain for 4qzi:
    30. Domain for 6go3:
    31. Domain for 6go4:
  3. 2716730Norway rat (Rattus norvegicus) [TaxId:10116] [255607] (2 PDB entries)
    1. Domains for 1cf6:
      1. 2716732Domain d1cf6a4: 1cf6 A:92-148 [302273]
        Other proteins in same PDB: d1cf6a3, d1cf6a5, d1cf6b3, d1cf6b5
        automated match to d4klia2
        protein/DNA complex; complexed with cr, ucp
      2. 2716733Domain d1cf6b4: 1cf6 B:92-148 [302276]
        Other proteins in same PDB: d1cf6a3, d1cf6a5, d1cf6b3, d1cf6b5
        automated match to d4klia2
        protein/DNA complex; complexed with cr, ucp
    2. Domain for 2van:

More info for Protein automated matches from a.60.12.0: automated matches

Timeline for Protein automated matches from a.60.12.0: automated matches: