Class a: All alpha proteins [46456] (289 folds) |
Fold a.60: SAM domain-like [47768] (16 superfamilies) 4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins |
Superfamily a.60.6: DNA polymerase beta, N-terminal domain-like [47802] (2 families) contains one classic and one pseudo HhH motifs |
Family a.60.6.0: automated matches [254214] (1 protein) not a true family |
Protein automated matches [254482] (3 species) not a true protein |
Human (Homo sapiens) [TaxId:9606] [255046] (17 PDB entries) |
Domain d2bcra1: 2bcr A:251-328 [128307] Other proteins in same PDB: d2bcra2, d2bcra3 automated match to d1rzta1 protein/DNA complex; complexed with edo, mg, na, ppv |
Domain d2bcsa1: 2bcs A:252-328 [128310] Other proteins in same PDB: d2bcsa2, d2bcsa3 automated match to d1rzta1 protein/DNA complex; complexed with mg, na, ppv |
Domain d2bcua1: 2bcu A:250-328 [128313] Other proteins in same PDB: d2bcua2, d2bcua3 automated match to d1rzta1 protein/DNA complex; complexed with na, ppv |
Domain d2bcva1: 2bcv A:253-328 [128316] Other proteins in same PDB: d2bcva2, d2bcva3 automated match to d1rzta1 protein/DNA complex; complexed with mg, na, ttp |
Domain d4lzda1: 4lzd A:137-230 [266710] Other proteins in same PDB: d4lzda2, d4lzda3 automated match to d2ihma1 complexed with cl, edo, imd, na |
Domain d5zlca1: 5zlc A:137-230 [369430] Other proteins in same PDB: d5zlca2, d5zlca3 automated match to d4lzda1 protein/DNA complex; complexed with dgt, mn, so4 |
Domain d6aeca1: 6aec A:137-230 [369251] Other proteins in same PDB: d6aeca2, d6aeca3 automated match to d4lzda1 protein/DNA complex; complexed with atp, mn, so4 |
Domain d6aeha1: 6aeh A:138-230 [369278] Other proteins in same PDB: d6aeha2, d6aeha3 automated match to d4lzda1 protein/DNA complex; complexed with mn, so4, utp |
Domain d6ak5a1: 6ak5 A:137-230 [369286] Other proteins in same PDB: d6ak5a2, d6ak5a3 automated match to d4lzda1 protein/DNA complex; complexed with gtp, mn, so4 |
Domain d6ak6a1: 6ak6 A:137-230 [369250] Other proteins in same PDB: d6ak6a2, d6ak6a3 automated match to d4lzda1 protein/DNA complex; complexed with ctp, mn, so4 |
Domain d6ipha1: 6iph A:137-230 [369338] Other proteins in same PDB: d6ipha2, d6ipha3 automated match to d4lzda1 protein/DNA complex; complexed with dtp, mn, so4 |
Domain d6ipia1: 6ipi A:137-230 [369330] Other proteins in same PDB: d6ipia2, d6ipia3 automated match to d4lzda1 protein/DNA complex; complexed with dcp, mn, so4 |
Domain d6ipja1: 6ipj A:137-230 [369395] Other proteins in same PDB: d6ipja2, d6ipja3 automated match to d4lzda1 protein/DNA complex; complexed with mn, so4, ttp |
Domain d6ipka1: 6ipk A:138-230 [369335] Other proteins in same PDB: d6ipka2, d6ipka3 automated match to d4lzda1 protein/DNA complex; complexed with 8dg, epe, mn, so4 |
Domain d6ipla1: 6ipl A:137-230 [369357] Other proteins in same PDB: d6ipla2, d6ipla3 automated match to d4lzda1 protein/DNA complex; complexed with dtp, mg, so4 |
Domain d6ipma1: 6ipm A:137-230 [369384] Other proteins in same PDB: d6ipma2, d6ipma3 automated match to d4lzda1 protein/DNA complex; complexed with dcp, mg, so4 |
Domain d6ipna1: 6ipn A:137-230 [369322] Other proteins in same PDB: d6ipna2, d6ipna3 automated match to d4lzda1 protein/DNA complex; complexed with dgt, mg, so4 |
Mouse (Mus musculus) [TaxId:10090] [255236] (31 PDB entries) |
Domain d2ihma1: 2ihm A:137-230 [242123] Other proteins in same PDB: d2ihma2, d2ihma3, d2ihmb2, d2ihmb3 automated match to d1jmsa1 protein/DNA complex; complexed with d3t, mg, na |
Domain d2ihmb1: 2ihm B:137-230 [242126] Other proteins in same PDB: d2ihma2, d2ihma3, d2ihmb2, d2ihmb3 automated match to d1jmsa1 protein/DNA complex; complexed with d3t, mg, na |
Domain d4i27a1: 4i27 A:146-242 [252546] Other proteins in same PDB: d4i27a2, d4i27a3 automated match to d1jmsa1 protein/DNA complex; complexed with d3t, mg, na |
Domain d4i28a1: 4i28 A:149-242 [252549] Other proteins in same PDB: d4i28a2, d4i28a3 automated match to d1jmsa1 protein/DNA complex; complexed with mg, na, zn |
Domain d4i29a1: 4i29 A:149-242 [252552] Other proteins in same PDB: d4i29a2, d4i29a3 automated match to d1jmsa1 protein/DNA complex; complexed with mn, na |
Domain d4i2aa1: 4i2a A:149-242 [252555] Other proteins in same PDB: d4i2aa2, d4i2aa3 automated match to d1jmsa1 protein/DNA complex; complexed with mg, na |
Domain d4i2ba1: 4i2b A:149-242 [252558] Other proteins in same PDB: d4i2ba2, d4i2ba3 automated match to d1jmsa1 protein/DNA complex; complexed with apc, mg, na |
Domain d4i2ca1: 4i2c A:149-242 [252561] Other proteins in same PDB: d4i2ca2, d4i2ca3 automated match to d1jmsa1 protein/DNA complex; complexed with apc, mn, na |
Domain d4i2da1: 4i2d A:149-242 [252564] Other proteins in same PDB: d4i2da2, d4i2da3 automated match to d1jmsa1 complexed with apc, mg, na, zn |
Domain d4i2ea1: 4i2e A:149-242 [252567] Other proteins in same PDB: d4i2ea2, d4i2ea3 automated match to d1jmsa1 protein/DNA complex; complexed with apc, co, na |
Domain d4i2fa1: 4i2f A:149-242 [252570] Other proteins in same PDB: d4i2fa2, d4i2fa3 automated match to d1jmsa1 protein/DNA complex; complexed with mg, na, zn |
Domain d4i2ga1: 4i2g A:149-242 [252573] Other proteins in same PDB: d4i2ga2, d4i2ga3 automated match to d1jmsa1 protein/DNA complex; complexed with co, mg, na |
Domain d4i2ha1: 4i2h A:149-242 [252576] Other proteins in same PDB: d4i2ha2, d4i2ha3 automated match to d1jmsa1 protein/DNA complex; complexed with apc, mg, na, zn |
Domain d4i2ia1: 4i2i A:148-242 [252579] Other proteins in same PDB: d4i2ia2, d4i2ia3 automated match to d1jmsa1 complexed with ap5, mg, zn |
Domain d4i2ja1: 4i2j A:149-242 [252582] Other proteins in same PDB: d4i2ja2, d4i2ja3 automated match to d1jmsa1 complexed with dcp, zn |
Domain d4iqta1: 4iqt A:149-242 [252672] Other proteins in same PDB: d4iqta2, d4iqta3 automated match to d1jmsa1 complexed with 1fo |
Domain d4iqua1: 4iqu A:149-242 [252675] Other proteins in same PDB: d4iqua2, d4iqua3 automated match to d1jmsa1 complexed with 1fq, na |
Domain d4iqva1: 4iqv A:148-242 [252678] Other proteins in same PDB: d4iqva2, d4iqva3 automated match to d1jmsa1 protein/DNA complex; complexed with 1fo, na |
Domain d4iqwa1: 4iqw A:149-242 [252681] Other proteins in same PDB: d4iqwa2, d4iqwa3 automated match to d1jmsa1 protein/DNA complex; complexed with 1fq, na |
Domain d4qz8a1: 4qz8 A:148-242 [273686] Other proteins in same PDB: d4qz8a2, d4qz8a3 automated match to d1jmsa1 protein/DNA complex; complexed with dct, mg, na |
Domain d4qz9a1: 4qz9 A:147-242 [273689] Other proteins in same PDB: d4qz9a2, d4qz9a3 automated match to d1jmsa1 protein/DNA complex; complexed with dct, mg, na |
Domain d4qzaa1: 4qza A:147-242 [273692] Other proteins in same PDB: d4qzaa2, d4qzaa3 automated match to d1jmsa1 protein/DNA complex; complexed with dct, mg, na |
Domain d4qzba1: 4qzb A:147-242 [273694] Other proteins in same PDB: d4qzba2, d4qzba3 automated match to d1jmsa1 protein/DNA complex; complexed with dct, mg, na |
Domain d4qzca1: 4qzc A:146-242 [273698] Other proteins in same PDB: d4qzca2, d4qzca3 automated match to d1jmsa1 protein/DNA complex; complexed with dct, mg, na; mutant |
Domain d4qzda1: 4qzd A:147-242 [273701] Other proteins in same PDB: d4qzda2, d4qzda3 automated match to d1jmsa1 protein/DNA complex; complexed with dct, mg, na; mutant |
Domain d4qzea1: 4qze A:148-242 [273713] Other proteins in same PDB: d4qzea2, d4qzea3 automated match to d1jmsa1 protein/DNA complex; complexed with dct, mg, na; mutant |
Domain d4qzfa1: 4qzf A:147-242 [273704] Other proteins in same PDB: d4qzfa2, d4qzfa3 automated match to d1jmsa1 protein/DNA complex; complexed with dct, mg, na; mutant |
Domain d4qzga1: 4qzg A:148-242 [273707] Other proteins in same PDB: d4qzga2, d4qzga3 automated match to d1jmsa1 protein/DNA complex; complexed with dct, mg, na; mutant |
Domain d4qzha1: 4qzh A:149-242 [273710] Other proteins in same PDB: d4qzha2, d4qzha3 automated match to d1jmsa1 protein/DNA complex; complexed with dct, mg, na; mutant |
Domain d4qzia1: 4qzi A:148-242 [273716] Other proteins in same PDB: d4qzia2, d4qzia3 automated match to d1jmsa1 protein/DNA complex; complexed with dct, mg, na, zn; mutant |
Domain d6go3a1: 6go3 A:148-242 [369897] Other proteins in same PDB: d6go3a2, d6go3a3 automated match to d1jmsa1 |
Domain d6go4a1: 6go4 A:148-242 [369894] Other proteins in same PDB: d6go4a2, d6go4a3 automated match to d1jmsa1 protein/DNA complex; complexed with dct, mg, na |
Rattus norvegicus [311121] (1 PDB entry) |
Domain d1cf6a3: 1cf6 A:10-91 [302272] Other proteins in same PDB: d1cf6a4, d1cf6a5, d1cf6b4, d1cf6b5 automated match to d1tv9a1 protein/DNA complex; complexed with cr, ucp |
Domain d1cf6b3: 1cf6 B:10-91 [302275] Other proteins in same PDB: d1cf6a4, d1cf6a5, d1cf6b4, d1cf6b5 automated match to d1tv9a1 protein/DNA complex; complexed with cr, ucp |
Timeline for Protein automated matches from a.60.6.0: automated matches: