Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2223823Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2224181Fold f.3: Light-harvesting complex subunits [56917] (1 superfamily)
    membrane all-alpha fold
  4. 2224182Superfamily f.3.1: Light-harvesting complex subunits [56918] (2 families) (S)
  5. 2224236Family f.3.1.0: automated matches [254203] (1 protein)
    not a true family
  6. 2224237Protein automated matches [254444] (2 species)
    not a true protein

Species:

  1. 2224238Rhodospirillum rubrum [TaxId:1085] [254949] (1 PDB entry)
  2. 2224240Thermochromatium tepidum [TaxId:1050] [267909] (3 PDB entries)
    1. Domains for 3wmm:
      1. 2224241Domain d3wmm0_: 3wmm 0: [265691]
        Other proteins in same PDB: d3wmmc_, d3wmmh1, d3wmmh2, d3wmmm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      2. 2224242Domain d3wmm2_: 3wmm 2: [265692]
        Other proteins in same PDB: d3wmmc_, d3wmmh1, d3wmmh2, d3wmmm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      3. 2224243Domain d3wmm4_: 3wmm 4: [265693]
        Other proteins in same PDB: d3wmmc_, d3wmmh1, d3wmmh2, d3wmmm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      4. 2224244Domain d3wmm6_: 3wmm 6: [265694]
        Other proteins in same PDB: d3wmmc_, d3wmmh1, d3wmmh2, d3wmmm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      5. 2224245Domain d3wmm8_: 3wmm 8: [265695]
        Other proteins in same PDB: d3wmmc_, d3wmmh1, d3wmmh2, d3wmmm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      6. 2224246Domain d3wmmb_: 3wmm B: [265696]
        Other proteins in same PDB: d3wmmc_, d3wmmh1, d3wmmh2, d3wmmm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      7. 2224247Domain d3wmme_: 3wmm E: [265698]
        Other proteins in same PDB: d3wmmc_, d3wmmh1, d3wmmh2, d3wmmm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      8. 2224248Domain d3wmmg_: 3wmm G: [265699]
        Other proteins in same PDB: d3wmmc_, d3wmmh1, d3wmmh2, d3wmmm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      9. 2224249Domain d3wmmj_: 3wmm J: [265702]
        Other proteins in same PDB: d3wmmc_, d3wmmh1, d3wmmh2, d3wmmm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      10. 2224250Domain d3wmmn_: 3wmm N: [265704]
        Other proteins in same PDB: d3wmmc_, d3wmmh1, d3wmmh2, d3wmmm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      11. 2224251Domain d3wmmp_: 3wmm P: [265705]
        Other proteins in same PDB: d3wmmc_, d3wmmh1, d3wmmh2, d3wmmm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      12. 2224252Domain d3wmmr_: 3wmm R: [265706]
        Other proteins in same PDB: d3wmmc_, d3wmmh1, d3wmmh2, d3wmmm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      13. 2224253Domain d3wmmt_: 3wmm T: [265707]
        Other proteins in same PDB: d3wmmc_, d3wmmh1, d3wmmh2, d3wmmm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      14. 2224254Domain d3wmmv_: 3wmm V: [265708]
        Other proteins in same PDB: d3wmmc_, d3wmmh1, d3wmmh2, d3wmmm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      15. 2224255Domain d3wmmx_: 3wmm X: [265709]
        Other proteins in same PDB: d3wmmc_, d3wmmh1, d3wmmh2, d3wmmm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      16. 2224256Domain d3wmmz_: 3wmm Z: [265710]
        Other proteins in same PDB: d3wmmc_, d3wmmh1, d3wmmh2, d3wmmm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      17. 2291899Domain d3wmma_: 3wmm A: [335200]
        automated match to d3wmn5_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      18. 2291903Domain d3wmm7_: 3wmm 7: [335204]
        automated match to d3wmn5_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      19. 2291909Domain d3wmmy_: 3wmm Y: [335210]
        automated match to d3wmn5_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      20. 2291919Domain d3wmmq_: 3wmm Q: [335220]
        automated match to d3wmn5_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      21. 2291920Domain d3wmmk_: 3wmm K: [335221]
        automated match to d3wmn5_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      22. 2291923Domain d3wmmu_: 3wmm U: [335224]
        automated match to d3wmn5_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      23. 2291938Domain d3wmm3_: 3wmm 3: [335239]
        automated match to d3wmn5_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      24. 2291948Domain d3wmms_: 3wmm S: [335249]
        automated match to d3wmn5_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      25. 2291971Domain d3wmmd_: 3wmm D: [335272]
        automated match to d3wmn5_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      26. 2291976Domain d3wmmi_: 3wmm I: [335277]
        automated match to d3wmn5_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      27. 2291984Domain d3wmm5_: 3wmm 5: [335285]
        automated match to d3wmn5_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      28. 2291992Domain d3wmmo_: 3wmm O: [335293]
        automated match to d3wmn5_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      29. 2291997Domain d3wmmw_: 3wmm W: [335298]
        automated match to d3wmn5_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      30. 2292009Domain d3wmm1_: 3wmm 1: [335310]
        automated match to d3wmn5_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      31. 2292010Domain d3wmmf_: 3wmm F: [335311]
        automated match to d3wmn5_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
      32. 2292014Domain d3wmm9_: 3wmm 9: [335315]
        automated match to d3wmn5_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, pgw, po4, uq8
    2. Domains for 3wmn:
      1. 2224282Domain d3wmn0_: 3wmn 0: [306756]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      2. 2224283Domain d3wmn2_: 3wmn 2: [306757]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      3. 2224284Domain d3wmn4_: 3wmn 4: [306758]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      4. 2224285Domain d3wmn5_: 3wmn 5: [306759]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1xrda1
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      5. 2224286Domain d3wmn6_: 3wmn 6: [306760]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      6. 2224287Domain d3wmn7_: 3wmn 7: [306761]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1xrda1
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      7. 2224288Domain d3wmn8_: 3wmn 8: [306762]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      8. 2224289Domain d3wmna_: 3wmn A: [306763]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1xrda1
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      9. 2224290Domain d3wmnb_: 3wmn B: [306764]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      10. 2224291Domain d3wmne_: 3wmn E: [306766]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      11. 2224292Domain d3wmng_: 3wmn G: [306767]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      12. 2224293Domain d3wmnj_: 3wmn J: [306770]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      13. 2224294Domain d3wmnn_: 3wmn N: [306772]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      14. 2224295Domain d3wmnp_: 3wmn P: [306773]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      15. 2224296Domain d3wmnr_: 3wmn R: [306774]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      16. 2224297Domain d3wmnt_: 3wmn T: [306775]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      17. 2224298Domain d3wmnv_: 3wmn V: [306776]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      18. 2224299Domain d3wmnx_: 3wmn X: [306777]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      19. 2224300Domain d3wmnz_: 3wmn Z: [306778]
        Other proteins in same PDB: d3wmnc_, d3wmnh1, d3wmnh2, d3wmnm_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
    3. Domains for 3wmo:
      1. 2224257Domain d3wmo0_: 3wmo 0: [306779]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      2. 2224258Domain d3wmo1_: 3wmo 1: [306780]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1xrda1
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      3. 2224259Domain d3wmo2_: 3wmo 2: [306781]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      4. 2224260Domain d3wmo4_: 3wmo 4: [306782]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      5. 2224261Domain d3wmo5_: 3wmo 5: [306783]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1xrda1
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      6. 2224262Domain d3wmo6_: 3wmo 6: [306784]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      7. 2224263Domain d3wmo7_: 3wmo 7: [306785]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1xrda1
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      8. 2224264Domain d3wmo8_: 3wmo 8: [306786]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      9. 2224265Domain d3wmo9_: 3wmo 9: [306787]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1xrda1
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      10. 2224266Domain d3wmoa_: 3wmo A: [306788]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1xrda1
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      11. 2224267Domain d3wmob_: 3wmo B: [306789]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      12. 2224268Domain d3wmod_: 3wmo D: [306791]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1xrda1
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      13. 2224269Domain d3wmoe_: 3wmo E: [306792]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      14. 2224270Domain d3wmof_: 3wmo F: [306793]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1xrda1
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      15. 2224271Domain d3wmog_: 3wmo G: [306794]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      16. 2224272Domain d3wmoi_: 3wmo I: [306797]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1xrda1
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      17. 2224273Domain d3wmoj_: 3wmo J: [306798]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      18. 2224274Domain d3wmon_: 3wmo N: [306800]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      19. 2224275Domain d3wmop_: 3wmo P: [306801]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      20. 2224276Domain d3wmor_: 3wmo R: [306802]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      21. 2224277Domain d3wmot_: 3wmo T: [306803]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      22. 2224278Domain d3wmov_: 3wmo V: [306804]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      23. 2224279Domain d3wmox_: 3wmo X: [306805]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      24. 2224280Domain d3wmoy_: 3wmo Y: [306806]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1xrda1
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8
      25. 2224281Domain d3wmoz_: 3wmo Z: [306807]
        Other proteins in same PDB: d3wmoc_, d3wmoh1, d3wmoh2, d3wmom_
        automated match to d1wrga_
        complexed with bcl, bph, ca, crt, fe, hem, mq8, pef, po4, uq8

More info for Protein automated matches from f.3.1.0: automated matches

Timeline for Protein automated matches from f.3.1.0: automated matches: