SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class a: All alpha proteins [46456] (286 folds)
Fold a.11: Acyl-CoA binding protein-like [47026] (2 superfamilies)
core: 3 helices; bundle, closed, left-handed twist; up-and-down
Superfamily a.11.2: Second domain of FERM [47031] (2 families)
automatically mapped to Pfam PF00373
Family a.11.2.0: automated matches [254193] (1 protein)
not a true family
Protein automated matches [254423] (3 species)
not a true protein

Species:

Chicken (Gallus gallus) [TaxId:9031] [254874] (2 PDB entries)
1. Domain for 2j0m:
  - Domain d2j0ma1: 2j0m A:131-253 [147845]
    Other proteins in same PDB: d2j0ma2, d2j0ma3, d2j0mb_
    automated match to d2al6a1
    complexed with 4st
2. Domain for 3zdt:
  - Domain d3zdtb2: 3zdt B:131-253 [250760]
    Other proteins in same PDB: d3zdtb1, d3zdtb3
    automated match to d2al6a1
    mutant
Human (Homo sapiens) [TaxId:9606] [255207] (6 PDB entries)
1. Domain for 2he7:
  - Domain d2he7a2: 2he7 A:191-296 [242029]
    Other proteins in same PDB: d2he7a1, d2he7a3
    automated match to d1gg3a1
2. Domains for 3qij:
  1. Domain d3qija2: 3qij A:291-396 [248903]
    Other proteins in same PDB: d3qija1, d3qija3, d3qijb1, d3qijb3
    automated match to d1gg3a1
    complexed with unx
  2. Domain d3qijb2: 3qij B:291-396 [248906]
    Other proteins in same PDB: d3qija1, d3qija3, d3qijb1, d3qijb3
    automated match to d1gg3a1
    complexed with unx
3. Domain for 3u8z:
  - Domain d3u8zc2: 3u8z C:104-214 [250156]
    Other proteins in same PDB: d3u8za1, d3u8za2, d3u8zb1, d3u8zb2, d3u8zc1, d3u8zc3, d3u8zd1, d3u8zd2
    automated match to d2zpya1
4. Domains for 4ny0:
  1. Domain d4ny0a2: 4ny0 A:131-253 [254032]
    Other proteins in same PDB: d4ny0a1, d4ny0a3, d4ny0b1, d4ny0b3, d4ny0d1, d4ny0d3
    automated match to d2al6a1
  2. Domain d4ny0b2: 4ny0 B:131-253 [254035]
    Other proteins in same PDB: d4ny0a1, d4ny0a3, d4ny0b1, d4ny0b3, d4ny0d1, d4ny0d3
    automated match to d2al6a1
  3. Domain d4ny0d2: 4ny0 D:131-253 [254038]
    Other proteins in same PDB: d4ny0a1, d4ny0a3, d4ny0b1, d4ny0b3, d4ny0d1, d4ny0d3
    automated match to d2al6a1
5. Domains for 4zri:
  1. Domain d4zria2: 4zri A:104-214 [274141]
    Other proteins in same PDB: d4zria1, d4zria3, d4zrib1, d4zrib3
    automated match to d1h4ra1
  2. Domain d4zrib2: 4zri B:104-214 [274138]
    Other proteins in same PDB: d4zria1, d4zria3, d4zrib1, d4zrib3
    automated match to d1h4ra1
6. Domain for 4zrj:
  - Domain d4zrja2: 4zrj A:104-214 [274135]
    Other proteins in same PDB: d4zrja1, d4zrja3
    automated match to d1ni2a1
    complexed with gol
Mouse (Mus musculus) [TaxId:10090] [255101] (4 PDB entries)
1. Domains for 2d2q:
  1. Domain d2d2qa1: 2d2q A:88-198 [131182]
    Other proteins in same PDB: d2d2qa2, d2d2qa3, d2d2qb2, d2d2qb3
    automated match to d2zpya1
  2. Domain d2d2qb1: 2d2q B:88-198 [131185]
    Other proteins in same PDB: d2d2qa2, d2d2qa3, d2d2qb2, d2d2qb3
    automated match to d2zpya1
2. Domains for 3wa0:
  1. Domain d3wa0a2: 3wa0 A:104-214 [256458]
    Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
    automated match to d1h4ra1
  2. Domain d3wa0b2: 3wa0 B:104-214 [262355]
    Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
    automated match to d1h4ra1
  3. Domain d3wa0c2: 3wa0 C:104-214 [262358]
    Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
    automated match to d1h4ra1
  4. Domain d3wa0d2: 3wa0 D:104-214 [262361]
    Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
    automated match to d1h4ra1
  5. Domain d3wa0e2: 3wa0 E:104-214 [262364]
    Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
    automated match to d1h4ra1
  6. Domain d3wa0f2: 3wa0 F:104-214 [262367]
    Other proteins in same PDB: d3wa0a1, d3wa0a3, d3wa0b1, d3wa0b3, d3wa0c1, d3wa0c3, d3wa0d1, d3wa0d3, d3wa0e1, d3wa0e3, d3wa0f1, d3wa0f3
    automated match to d1h4ra1
3. Domains for 4p7i:
  1. Domain d4p7ia2: 4p7i A:104-214 [259915]
    Other proteins in same PDB: d4p7ia1, d4p7ia3, d4p7ib1, d4p7ib3
    automated match to d1h4ra1
    complexed with gol
  2. Domain d4p7ib2: 4p7i B:104-214 [263443]
    Other proteins in same PDB: d4p7ia1, d4p7ia3, d4p7ib1, d4p7ib3
    automated match to d1h4ra1
    complexed with gol
4. Domains for 4zrk:
  1. Domain d4zrka2: 4zrk A:104-214 [274131]
    Other proteins in same PDB: d4zrka1, d4zrka3, d4zrkb1, d4zrkb3, d4zrkc1, d4zrkc3, d4zrkd1, d4zrkd3
    automated match to d1h4ra1
  2. Domain d4zrkb2: 4zrk B:104-214 [274121]
    Other proteins in same PDB: d4zrka1, d4zrka3, d4zrkb1, d4zrkb3, d4zrkc1, d4zrkc3, d4zrkd1, d4zrkd3
    automated match to d1h4ra1
  3. Domain d4zrkc2: 4zrk C:104-214 [274124]
    Other proteins in same PDB: d4zrka1, d4zrka3, d4zrkb1, d4zrkb3, d4zrkc1, d4zrkc3, d4zrkd1, d4zrkd3
    automated match to d1h4ra1
  4. Domain d4zrkd2: 4zrk D:104-214 [274127]
    Other proteins in same PDB: d4zrka1, d4zrka3, d4zrkb1, d4zrkb3, d4zrkc1, d4zrkc3, d4zrkd1, d4zrkd3
    automated match to d1h4ra1

More info for Protein automated matches from a.11.2.0: automated matches

Timeline for Protein automated matches from a.11.2.0: automated matches:

Protein automated matches from a.11.2.0: automated matches first appeared in SCOPe 2.04
Protein automated matches from a.11.2.0: automated matches appears in SCOPe 2.06
Protein automated matches from a.11.2.0: automated matches appears in the current release, SCOPe 2.08