Lineage for d1d5mc1 (1d5m C:2-121)

  1. Root: SCOP 1.55
  2. 6992Class b: All beta proteins [48724] (93 folds)
  3. 13574Fold b.40: OB-fold [50198] (7 superfamilies)
  4. 13632Superfamily b.40.2: Bacterial enterotoxins [50203] (2 families) (S)
  5. 13929Family b.40.2.2: Superantigen toxins, N-terminal domain [50219] (11 proteins)
  6. 13940Protein Staphylococcal enterotoxin B, SEB [50226] (1 species)
  7. 13941Species Staphylococcus aureus [TaxId:1280] [50227] (10 PDB entries)
  8. Domain d1d5mc1: 1d5m C:2-121 [25185]
    Other proteins in same PDB: d1d5ma1, d1d5ma2, d1d5mb1, d1d5mb2, d1d5mc2

Details for d1d5mc1

PDB Entry: 1d5m (more details), 2 Å

PDB Description: x-ray crystal structure of hla-dr4 complexed with peptide and seb

SCOP Domain Sequences for d1d5mc1:

Sequence, based on SEQRES records: (download)

>d1d5mc1 b.40.2.2 (C:2-121) Staphylococcal enterotoxin B, SEB {Staphylococcus aureus}
sqpdpkpdelhksskftglmenmkvlyddnhvsainvksidqflyfdliysikdtklgny
dnvrvefknkdladkykdkyvdvfganyyyqcyfskktndinshqtdkrktcmyggvteh

Sequence, based on observed residues (ATOM records): (download)

>d1d5mc1 b.40.2.2 (C:2-121) Staphylococcal enterotoxin B, SEB {Staphylococcus aureus}
sqpdpkpdelhksskftglmenmkvlyddnhvsainvksidqflyfdliysikdtklgny
dnvrvefknkdladkykdkyvdvfganyyyqcyfskkkrktcmyggvteh

SCOP Domain Coordinates for d1d5mc1 are not available.

Timeline for d1d5mc1:

Domains from same chain:
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d1d5mc2
Domains from other chains:
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d1d5ma1, d1d5ma2, d1d5mb1, d1d5mb2