SCOPe 2.06: Domain d4egbd1: 4egb D:1-321

Lineage for d4egbd1 (4egb D:1-321)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (239 species)
   not a true protein

7. Species Bacillus anthracis [TaxId:198094] [189998] (4 PDB entries)

8. Domain d4egbd1: 4egb D:1-321 [251746]
   Other proteins in same PDB: d4egba2, d4egbb2, d4egbc2, d4egbd2, d4egbe2, d4egbf2, d4egbg2, d4egbh2
   automated match to d2hunb_
   complexed with nad, ni, so4, suc

Details for d4egbd1

PDB Entry: 4egb, 3 Å

PDB Description: 3.0 angstrom resolution crystal structure of dtdp-glucose 4,6- dehydratase (rfbb) from bacillus anthracis str. ames in complex with nad

PDB Compounds: (D:) dtdp-glucose 4,6-dehydratase

SCOPe Domain Sequences for d4egbd1:

Sequence, based on SEQRES records:

>d4egbd1 c.2.1.0 (D:1-321) automated matches {Bacillus anthracis [TaxId: 198094]}
mnilvtggagfigsnfvhymlqsyetykiinfdaltysgnlnnvksiqdhpnyyfvkgei
qngellehvikerdvqvivnfaaeshvdrsienpipfydtnvigtvtllelvkkyphikl
vqvstdevygslgktgrfteetplapnspyssskasadmialayyktyqlpvivtrcsnn
ygpyqypekliplmvtnalegkklplygdglnvrdwlhvtdhcsaidvvlhkgrvgevyn
iggnnektnvevveqiitllgktkkdieyvtdrlghdrryainaekmknefdwepkytfe
qglqetvqwyekneewwkplk

Sequence, based on observed residues (ATOM records):

>d4egbd1 c.2.1.0 (D:1-321) automated matches {Bacillus anthracis [TaxId: 198094]}
mnilvtggagfigsnfvhymlqsyetykiinfdaltysgnlnnvksiqdhpnyyfvkgei
qngellehvikerdvqvivnfaaesipfydtnvigtvtllelvkkyphiklvqvstdevy
gslgktgrfteetplapnspyssskasadmialayyktyqlpvivtrcsnnygpyqypek
liplmvtnalegkklplygdglnvrdwlhvtdhcsaidvvlhkgrvgevyniggnnektn
vevveqiitllgktkkdieyvtddrryainaekmknefdwepkytfeqglqetvqwyekn
eewwkplk

Timeline for d4egbd1:

• d4egbd1 first appeared in SCOPe 2.04, called d4egbd_
  
• d4egbd1 was called d4egbd_ in SCOPe 2.05
  
• d4egbd1 does not appear in SCOPe 2.07