Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds) |
Fold e.8: DNA/RNA polymerases [56671] (1 superfamily) divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members |
Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families) "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain |
Family e.8.1.1: DNA polymerase I [56673] (5 proteins) in the multi-domain class (e), this applies to domains with different numbers of (sub)domains than the most common domain |
Protein automated matches [226972] (9 species) not a true protein |
Species Geobacillus kaustophilus [TaxId:1462] [233275] (8 PDB entries) |
Domain d4dsea2: 4dse A:469-876 [251538] Other proteins in same PDB: d4dsea1, d4dsed1 automated match to d3pv8d2 protein/DNA complex; complexed with ctp, so4 |
PDB Entry: 4dse (more details), 1.67 Å
SCOPe Domain Sequences for d4dsea2:
Sequence, based on SEQRES records: (download)
>d4dsea2 e.8.1.1 (A:469-876) automated matches {Geobacillus kaustophilus [TaxId: 1462]} eqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefni nspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgklqstyi egllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwl ifaadysqielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakav nygivygisdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllh rrrylpditsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqahlllqv hdelileapkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak
>d4dsea2 e.8.1.1 (A:469-876) automated matches {Geobacillus kaustophilus [TaxId: 1462]} eqdrllveleqplssilaemefagvkvdtkrleqmgkelaeqlgtveqriyelagqefni nspkqlgvilfeklqlpvlkktktgystsadvleklapyheivenilhyrqlgklqstyi egllkvvrpatkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwl ifaadysqielrvlahiaeddnlmeafrrnyggisdyglaqnlnisrkeaaefieryfes fpgvkrymenivqeakqkgyvttllhrrrylpditsrnfnvrsfaermamntpiqgsaad iikkamidlnarlkeerlqahlllqvhdelileapkeemerlcrlvpevmeqavtlrvpl kvdyhygstwydak
Timeline for d4dsea2: