SCOPe 2.08: Domain d4apcb1: 4apc B:-11-284

Lineage for d4apcb1 (4apc B:-11-284)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.144: Protein kinase-like (PK-like) [56111] (1 superfamily)
   consists of two alpha+beta domains, C-terminal domain is mostly alpha helical

4. Superfamily d.144.1: Protein kinase-like (PK-like) [56112] (8 families)
   shares functional and structural similarities with the ATP-grasp fold and PIPK

5. Family d.144.1.0: automated matches [191359] (1 protein)
   not a true family

6. Protein automated matches [190417] (37 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187294] (1476 PDB entries)

8. Domain d4apcb1: 4apc B:-11-284 [251097]
   Other proteins in same PDB: d4apca2, d4apcb2
   automated match to d2v7oa_
   complexed with cl

Details for d4apcb1

PDB Entry: 4apc, 2.1 Å

PDB Description: crystal structure of human nima-related kinase 1 (nek1)

PDB Compounds: (B:) serine/threonine-protein kinase nek1

SCOPe Domain Sequences for d4apcb1:

Sequence, based on SEQRES records:

>d4apcb1 d.144.1.0 (B:-11-284) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vdlgtenlyfqsmekyvrlqkigegsfgkailvkstedgrqyvikeinisrmsskerees
rrevavlanmkhpnivqyresfeengslyivmdyceggdlfkrinaqkgvlfqedqildw
fvqiclalkhvhdrkilhrdiksqnifltkdgtvqlgdfgiarvlnstvelaracigtpy
ylspeicenkpynnksdiwalgcvlyelctlkhafeagsmknlvlkiisgsfppvslhys
ydlrslvsqlfkrnprdrpsvnsilekgfiakriekflspqliaeefclktfskfg

Sequence, based on observed residues (ATOM records):

>d4apcb1 d.144.1.0 (B:-11-284) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vdlgtenlyfqsmekyvrlqkigkailvkstedgrqyvikeinisrmsskereesrreva
vlanmkhpnivqyresfeengslyivmdyceggdlfkrinaqkgvlfqedqildwfvqic
lalkhvhdrkilhrdiksqnifltkdgtvqlgdfgiarvlnstvelaracigtpyylspe
icenkpynnksdiwalgcvlyelctlkhafeagsmknlvlkiisgsfppvslhysydlrs
lvsqlfkrnprdrpsvnsilekgfiakriekflspqliaeefclktfskfg

Timeline for d4apcb1:

• d4apcb1 first appeared in SCOPe 2.04, called d4apcb_
  
• d4apcb1 appears in SCOPe 2.07