SCOPe 2.06: Domain d4a6ub_: 4a6u B:

Lineage for d4a6ub_ (4a6u B:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.0: automated matches [191328] (1 protein)
   not a true family

6. Protein automated matches [190151] (121 species)
   not a true protein

7. Species Chromobacterium violaceum [TaxId:536] [234042] (7 PDB entries)

8. Domain d4a6ub_: 4a6u B: [250950]
   automated match to d4a6tb_
   complexed with na, scn

Details for d4a6ub_

PDB Entry: 4a6u, 1.69 Å

PDB Description: crystal structure of the omega transaminase from chromobacterium violaceum in the apo form, crystallised from peg 3350

PDB Compounds: (B:) omega transaminase

SCOPe Domain Sequences for d4a6ub_:

Sequence, based on SEQRES records:

>d4a6ub_ c.67.1.0 (B:) automated matches {Chromobacterium violaceum [TaxId: 536]}
rvmtrgegvylwdsegnkiidgmaglwcvnvgygrkdfaeaarrqmeelpfyntffktth
pavvelssllaevtpagfdrvfytnsgsesvdtmirmvrrywdvqgkpekktligrwngy
hgstiggaslggmkymheqgdlpipgmahieqpwwykhgkdmtpdefgvvaarwleekil
eigadkvaafvgepiqgaggvivppatywpeiericrkydvllvadevicgfgrtgewfg
hqhfgfqpdlftaakglssgylpigavfvgkrvaegliaggdfnhgftysghpvcaavah
anvaalrdegivqrvkddigpymqkrwretfsrfehvddvrgvgmvqaftlvknkakrel
fpdfgeigtlcrdiffrnnlimracgdhivsapplvmtraevdemlavaercleefeqtl
kargla

Sequence, based on observed residues (ATOM records):

>d4a6ub_ c.67.1.0 (B:) automated matches {Chromobacterium violaceum [TaxId: 536]}
rvmtrgegvylwdsegnkiidgmaglwcvnvgygrkdfaeaarrqmeelpfyntffktth
pavvelssllaevtpagfdrvfytnsgsesvdtmirmvrrywdvqgkpekktligrwngm
ahieqpwwykhgkdmtpdefgvvaarwleekileigadkvaafvgepiqgaggvivppat
ywpeiericrkydvllvadevicgfgrtgewfghqhfgfqpdlftaakglssgylpigav
fvgkrvaegltysghpvcaavahanvaalrdegivqrvkddigpymqkrwretfsrfehv
ddvrgvgmvqaftlvknkakrelfpdfgeigtlcrdiffrnnlimracgdhivsapplvm
traevdemlavaercleefeqtlkargla

Timeline for d4a6ub_:

• d4a6ub_ first appeared in SCOPe 2.04
  
• d4a6ub_ appears in SCOPe 2.05
  
• d4a6ub_ appears in SCOPe 2.07
  
• d4a6ub_ appears in the current release, SCOPe 2.08