SCOPe 2.08: Domain d3rmxd1: 3rmx D:862-1067

Lineage for d3rmxd1 (3rmx D:862-1067)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
   sandwich; 12-14 strands in 2 sheets; complex topology

4. Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (27 families)

5. Family b.29.1.0: automated matches [191363] (1 protein)
   not a true family

6. Protein automated matches [190437] (70 species)
   not a true protein

7. Species Clostridium botulinum [TaxId:1491] [225675] (24 PDB entries)

8. Domain d3rmxd1: 3rmx D:862-1067 [249178]
   Other proteins in same PDB: d3rmxa2, d3rmxb2, d3rmxc2, d3rmxd2
   automated match to d3pmea1
   mutant

Details for d3rmxd1

PDB Entry: 3rmx, 2.75 Å

PDB Description: Crystal structure of HCR/D F1240A mutant

PDB Compounds: (D:) Botulinum neurotoxin type D

SCOPe Domain Sequences for d3rmxd1:

Sequence, based on SEQRES records:

>d3rmxd1 b.29.1.0 (D:862-1067) automated matches {Clostridium botulinum [TaxId: 1491]}
nsindskilslqnkknalvdtsgynaevrvgdnvqlntiytndfklsssgdkiivnlnnn
ilysaiyenssvsfwikiskdltnshneytiinsieqnsgwklcirngniewilqdvnrk
ykslifdyseslshtgytnkwffvtitnnimgymklyingelkqsqkiedldevkldkti
vfgidenidenqmlwirdfnifskel

Sequence, based on observed residues (ATOM records):

>d3rmxd1 b.29.1.0 (D:862-1067) automated matches {Clostridium botulinum [TaxId: 1491]}
nsindskilslqnkknalvdtsgynaevrvgdnvqlntiytndfklsssgdkiivnlnnn
ilyenssvsfwikiskdltnshneytiinsieqnsgwklcirngniewilqdvnrkyksl
ifdyseslshtgytnkwffvtitnnimgymklyingelkqsqkiedldevkldktivfgi
denidenqmlwirdfnifskel

Timeline for d3rmxd1:

• d3rmxd1 first appeared in SCOPe 2.04
  
• d3rmxd1 appears in SCOPe 2.07