SCOPe 2.06: Domain d3pmna1: 3pmn A:249-328

Lineage for d3pmna1 (3pmn A:249-328)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.60: SAM domain-like [47768] (16 superfamilies)
   4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins

4. Superfamily a.60.6: DNA polymerase beta, N-terminal domain-like [47802] (2 families)
   contains one classic and one pseudo HhH motifs

5. Family a.60.6.1: DNA polymerase beta, N-terminal domain-like [47803] (3 proteins)

6. Protein DNA polymerase lambda [101251] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [101252] (28 PDB entries)

8. Domain d3pmna1: 3pmn A:249-328 [248527]
   Other proteins in same PDB: d3pmna2, d3pmna3
   automated match to d1rzta1
   protein/DNA complex; complexed with 1gc, cl, mg, mn, na

Details for d3pmna1

PDB Entry: 3pmn, 2.2 Å

PDB Description: ternary crystal structure of polymerase lambda variant with a GT mispair at the primer terminus with Mn2+ in the active site

PDB Compounds: (A:) DNA polymerase lambda

SCOPe Domain Sequences for d3pmna1:

Sequence; same for both SEQRES and ATOM records:

>d3pmna1 a.60.6.1 (A:249-328) DNA polymerase lambda {Human (Homo sapiens) [TaxId: 9606]}
atnhnlhiteklevlakaysvqgdkwralgyakainalksfhkpvtsyqeacsipgigkr
maekiieilesghlrkldhi

Timeline for d3pmna1:

• d3pmna1 first appeared in SCOPe 2.04
  
• d3pmna1 appears in SCOPe 2.05
  
• d3pmna1 appears in SCOPe 2.07
  
• d3pmna1 appears in the current release, SCOPe 2.08