SCOPe 2.04: Domain d3p83a2: 3p83 A:123-244

Lineage for d3p83a2 (3p83 A:123-244)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.131: DNA clamp [55978] (1 superfamily)
   contains two helices and two beta sheets
   duplication: fold has internal pseudo two-fold symmetry

4. Superfamily d.131.1: DNA clamp [55979] (3 families)

5. Family d.131.1.2: DNA polymerase processivity factor [55983] (5 proteins)
   duplication: consists of two domains of this fold

6. Protein automated matches [227006] (4 species)
   not a true protein

7. Species Archaeoglobus fulgidus [TaxId:2234] [256015] (1 PDB entry)

8. Domain d3p83a2: 3p83 A:123-244 [248431]
   Other proteins in same PDB: d3p83d_, d3p83e_, d3p83f_
   automated match to d1rwza2
   protein/DNA complex; protein/RNA complex

Details for d3p83a2

PDB Entry: 3p83, 3.05 Å

PDB Description: Structure of the PCNA:RNase HII complex from Archaeoglobus fulgidus.

PDB Compounds: (A:) DNA polymerase sliding clamp

SCOPe Domain Sequences for d3p83a2:

Sequence; same for both SEQRES and ATOM records:

>d3p83a2 d.131.1.2 (A:123-244) automated matches {Archaeoglobus fulgidus [TaxId: 2234]}
pelelpakivmdagefkkaiaaadkisdqvifrsdkegfrieakgdvdsivfhmteteli
efnggearsmfsvdylkefckvagsgdlltihlgtnypvrlvfelvggrakveyilapri
es

Timeline for d3p83a2:

• d3p83a2 is new in SCOPe 2.04-stable
  
• d3p83a2 appears in SCOPe 2.05
  
• d3p83a2 appears in the current release, SCOPe 2.08