SCOPe 2.04: Domain d3ogva1: 3ogv A:38-393

Lineage for d3ogva1 (3ogv A:38-393)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.0: automated matches [191314] (1 protein)
   not a true family

6. Protein automated matches [190075] (60 species)
   not a true protein

7. Species Trichoderma reesei [TaxId:51453] [225935] (5 PDB entries)

8. Domain d3ogva1: 3ogv A:38-393 [248265]
   Other proteins in same PDB: d3ogva2, d3ogva3, d3ogva4, d3ogva5
   automated match to d1tg7a5
   complexed with nag, ptq

Details for d3ogva1

PDB Entry: 3ogv, 1.4 Å

PDB Description: complex structure of beta-galactosidase from trichoderma reesei with petg

PDB Compounds: (A:) beta-galactosidase

SCOPe Domain Sequences for d3ogva1:

Sequence; same for both SEQRES and ATOM records:

>d3ogva1 c.1.8.0 (A:38-393) automated matches {Trichoderma reesei [TaxId: 51453]}
akgplqnivtwdehslfvhgervvifsgevhpfrlpvpslyldvfhkikalgfntvsfyv
dwallegkpgrfradgifslepffeaatkagiyllarpgpyinaevsgggfpgwlqrvkg
klrtdapdylhatdnyvahiasiiakaqitnggpvilyqpeneysgaaegvlfpnkpymq
yvidqarnagiivplinndafpggtgapgtglgsvdiyghdgyplgfdcahpsawpdngl
pttwrqdhlnispstpfslvefqggafdpfggwgfeqcsalvnhefervfyknnmaagvt
ifniymtfggtnwgnlghpggytsydygasiredrridrekyselklqgqflkvsp

Timeline for d3ogva1:

• d3ogva1 is new in SCOPe 2.04-stable
  
• d3ogva1 appears in SCOPe 2.05
  
• d3ogva1 appears in the current release, SCOPe 2.08