SCOPe 2.04: Domain d3d2rb1: 3d2r B:20-180

Lineage for d3d2rb1 (3d2r B:20-180)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.29: Bromodomain-like [47363] (15 superfamilies)
   4 helices; bundle; minor mirror variant of up-and-down topology

4. Superfamily a.29.5: alpha-ketoacid dehydrogenase kinase, N-terminal domain [69012] (2 families)
   automatically mapped to Pfam PF10436

5. Family a.29.5.0: automated matches [230678] (1 protein)
   not a true family

6. Protein automated matches [230679] (2 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [230680] (8 PDB entries)

8. Domain d3d2rb1: 3d2r B:20-180 [245606]
   Other proteins in same PDB: d3d2ra2, d3d2rb2
   automated match to d2bu8a1
   complexed with adp, gol, mg

Details for d3d2rb1

PDB Entry: 3d2r, 2.03 Å

PDB Description: Crystal structure of pyruvate dehydrogenase kinase isoform 4 in complex with ADP

PDB Compounds: (B:) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4

SCOPe Domain Sequences for d3d2rb1:

Sequence, based on SEQRES records:

>d3d2rb1 a.29.5.0 (B:20-180) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vprevehfsryspsplsmkqlldfgsenacertsfaflrqelpvrlanilkeidilptql
vntssvqlvkswyiqslmdlvefhekspddqkalsdfvdtlikvrnrhhnvvptmaqgii
eykdactvdpvtnqnlqyfldrfymnristrmlmnqhilif

Sequence, based on observed residues (ATOM records):

>d3d2rb1 a.29.5.0 (B:20-180) automated matches {Human (Homo sapiens) [TaxId: 9606]}
vprevehfsryspsplsmkqlldfgsenacertsfaflrqelpvrlanilkeidilptql
vntssvqlvkswyiqslmdlvefhekspddqkalsdfvdtlikvrnrhhnvvptmaqgii
eykactvdpvtnqnlqyfldrfymnristrmlmnqhilif

Timeline for d3d2rb1:

• d3d2rb1 is new in SCOPe 2.04-stable
  
• d3d2rb1 appears in SCOPe 2.05
  
• d3d2rb1 appears in the current release, SCOPe 2.08