Lineage for d3c38a_ (3c38 A:)

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2210472Fold d.110: Profilin-like [55769] (10 superfamilies)
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. 2211190Superfamily d.110.6: Sensory domain-like [103190] (3 families) (S)
    alpha(2)-beta(2)-alpha(2)-beta(3); possibly related to the PAS domain
  5. 2211236Family d.110.6.3: LuxQ-periplasmic domain-like [160679] (1 protein)
    Pfam PF09308; two-domain arrangement similar to the YkuI C-terminal domain-like
  6. 2211237Protein Autoinducer 2 sensor kinase/phosphatase LuxQ [160680] (3 species)
  7. 2211240Species Vibrio cholerae [TaxId:666] [255771] (1 PDB entry)
  8. 2211241Domain d3c38a_: 3c38 A: [245449]
    automated match to d1zhhb1

Details for d3c38a_

PDB Entry: 3c38 (more details), 2.3 Å

PDB Description: Crystal structure of the periplasmic domain of Vibrio Cholerae LuxQ
PDB Compounds: (A:) Autoinducer 2 sensor kinase/phosphatase luxQ

SCOPe Domain Sequences for d3c38a_:

Sequence, based on SEQRES records: (download)

>d3c38a_ d.110.6.3 (A:) Autoinducer 2 sensor kinase/phosphatase LuxQ {Vibrio cholerae [TaxId: 666]}
tsvqtssliqslfdfrlaalrihqdstaknaslinalvsrdssrldeffssvdelelsna
pdlrfisshdnilwddgnasfygiaqqelnklirrvaisgnwhlvqtpsegksvhilmrr
sslieagtgqvvgylyvgivlndnfallenirsgsnsenlvlavdttplvstlkgnepys
ldyvvhsakdamrdsfivgqtflevesvptylcvysiqtn

Sequence, based on observed residues (ATOM records): (download)

>d3c38a_ d.110.6.3 (A:) Autoinducer 2 sensor kinase/phosphatase LuxQ {Vibrio cholerae [TaxId: 666]}
tsvqtssliqslfdfrlaalrihqdstaknaslinalvsrdssrldeffssvdelelsna
pdlrfisshdnilwddgnasfygiaqqelnklirrvaisgnwhlvqtpsegksvhilmrr
sslieaggqvvgylyvgivlndnfallenirsgsnsenlvlavdttplvstlkgnepysl
dyvvhsakdadsfivgqtflevesvptylcvysiqtn

SCOPe Domain Coordinates for d3c38a_:

Click to download the PDB-style file with coordinates for d3c38a_.
(The format of our PDB-style files is described here.)

Timeline for d3c38a_: