SCOPe 2.06: Domain d3be8b1: 3be8 B:44-597

Lineage for d3be8b1 (3be8 B:44-597)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.69: alpha/beta-Hydrolases [53473] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 8 strands, order 12435678, strand 2 is antiparallel to the rest

4. Superfamily c.69.1: alpha/beta-Hydrolases [53474] (42 families)
   many members have left-handed crossover connection between strand 8 and additional strand 9

5. Family c.69.1.0: automated matches [191404] (1 protein)
   not a true family

6. Protein automated matches [190543] (91 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [188340] (73 PDB entries)

8. Domain d3be8b1: 3be8 B:44-597 [245368]
   Other proteins in same PDB: d3be8a2, d3be8b2
   automated match to d3b3qa_
   complexed with cl, flc, gol, na, nag, po4

Details for d3be8b1

PDB Entry: 3be8, 2.2 Å

PDB Description: crystal structure of the synaptic protein neuroligin 4

PDB Compounds: (B:) neuroligin-4, x-linked

SCOPe Domain Sequences for d3be8b1:

Sequence, based on SEQRES records:

>d3be8b1 c.69.1.0 (B:44-597) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qypvvntnygkirglrtplpneilgpveqylgvpyaspptgerrfqppeppsswtgirnt
tqfaavcpqhldersllhdmlpiwftanldtlmtyvqdqnedclylniyvpteddihdqn
skkpvmvyihggsymegtgnmidgsilasygnvivitinyrlgilgflstgdqaakgnyg
lldqiqalrwieenvgafggdpkrvtifgsgagascvslltlshyseglfqkaiiqsgta
lsswavnyqpakytriladkvgcnmldttdmveclrnknykeliqqtitpatyhiafgpv
idgdvipddpqilmeqgeflnydimlgvnqgeglkfvdgivdnedgvtpndfdfsvsnfv
dnlygypegkdtlretikfmytdwadkenpetrrktlvalftdhqwvapavatadlhaqy
gsptyfyafyhhcqsemkpswadsahgdevpyvfgipmigptelfscnfskndvmlsavv
mtywtnfaktgdpnqpvpqdtkfihtkpnrfeevawsrynpkdqlylhiglkprvrdhyr
atkvafwlelvphl

Sequence, based on observed residues (ATOM records):

>d3be8b1 c.69.1.0 (B:44-597) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qypvvntnygkirglrtplpneilgpveqylgvpyaspptgerrfqppeppsswtgirnt
tqfaavcpqhldersllhdmlpiwftanldtlmtyvqdqnedclylniyvpteskkpvmv
yihggsymegtgnmidgsilasygnvivitinyrlgilgflstgdqaakgnyglldqiqa
lrwieenvgafggdpkrvtifgsgagascvslltlshyseglfqkaiiqsgtalsswavn
yqpakytriladkvgcnmldttdmveclrnknykeliqqtitpatyhiafgpvidgdvip
ddpqilmeqgeflnydimlgvnqgeglkfvdgivdnedgvtpndfdfsvsnfvdnlygyp
egkdtlretikfmytdwadkenpetrrktlvalftdhqwvapavatadlhaqygsptyfy
afyhhcqsemkpswadsahgdevpyvfgipmigptelfscnfskndvmlsavvmtywtnf
aktgdpnqpvevawsrynpkdqlylhiglkprvrdhyratkvafwlelvphl

Timeline for d3be8b1:

• d3be8b1 first appeared in SCOPe 2.04, called d3be8b_
  
• d3be8b1 was called d3be8b_ in SCOPe 2.05
  
• d3be8b1 appears in SCOPe 2.07
  
• d3be8b1 appears in the current release, SCOPe 2.08