SCOPe 2.06: Domain d3b0ad1: 3b0a D:1-76

Lineage for d3b0ad1 (3b0a D:1-76)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (8 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54239] (209 PDB entries)
   Uniprot P62988
   identical sequence in many other species

8. Domain d3b0ad1: 3b0a D:1-76 [245321]
   automated match to d4auqc_
   complexed with tam, zn

Details for d3b0ad1

PDB Entry: 3b0a, 1.9 Å

PDB Description: Crystal structure of the mouse HOIL1-L-NZF in complex with linear di-ubiquitin

PDB Compounds: (D:) Polyubiquitin-C

SCOPe Domain Sequences for d3b0ad1:

Sequence; same for both SEQRES and ATOM records:

>d3b0ad1 d.15.1.1 (D:1-76) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

Timeline for d3b0ad1:

• d3b0ad1 first appeared in SCOPe 2.04
  
• d3b0ad1 appears in SCOPe 2.05
  
• d3b0ad1 appears in SCOPe 2.07
  
• d3b0ad1 appears in the current release, SCOPe 2.08