SCOPe 2.05: Domain d3b08d2: 3b08 D:77-151

Lineage for d3b08d2 (3b08 D:77-151)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (9 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (7 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54239] (149 PDB entries)
   Uniprot P62988
   identical sequence in many other species

8. Domain d3b08d2: 3b08 D:77-151 [245314]
   automated match to d4auqc_
   complexed with tre, zn

Details for d3b08d2

PDB Entry: 3b08, 1.7 Å

PDB Description: crystal structure of the mouse hoil1-l-nzf in complex with linear di- ubiquitin

PDB Compounds: (D:) Polyubiquitin-C

SCOPe Domain Sequences for d3b08d2:

Sequence; same for both SEQRES and ATOM records:

>d3b08d2 d.15.1.1 (D:77-151) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrg

Timeline for d3b08d2:

• d3b08d2 first appeared in SCOPe 2.04
  
• d3b08d2 appears in SCOPe 2.06
  
• d3b08d2 appears in the current release, SCOPe 2.08