SCOPe 2.08: Domain d3apma2: 3apm A:113-293

Lineage for d3apma2 (3apm A:113-293)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
   sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold

4. Superfamily b.2.9: Peptidylarginine deiminase Pad4, middle domain [110083] (2 families)
   automatically mapped to Pfam PF08527

5. Family b.2.9.1: Peptidylarginine deiminase Pad4, middle domain [110084] (1 protein)

6. Protein Peptidylarginine deiminase Pad4, middle domain [110085] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [110086] (17 PDB entries)
   Uniprot Q9UM07

8. Domain d3apma2: 3apm A:113-293 [245185]
   Other proteins in same PDB: d3apma1, d3apma3
   automated match to d2dexx1

Details for d3apma2

PDB Entry: 3apm, 2.5 Å

PDB Description: Crystal structure of the human SNP PAD4 protein

PDB Compounds: (A:) Protein-arginine deiminase type-4

SCOPe Domain Sequences for d3apma2:

Sequence, based on SEQRES records:

>d3apma2 b.2.9.1 (A:113-293) Peptidylarginine deiminase Pad4, middle domain {Human (Homo sapiens) [TaxId: 9606]}
veislcaditrtgkvkptravkdqrtwtwgpcgqgaillvncdrdnlessamdceddevl
dsedlqdmslmtlstktpkdfftnhtlvlhvarsemdkvrvfqatrgklsskcsvvlgpk
wpshylmvpggkhnmdfyvealafpdtdfpglitltislldtsnlelpeavvfqdsvvfr
v

Sequence, based on observed residues (ATOM records):

>d3apma2 b.2.9.1 (A:113-293) Peptidylarginine deiminase Pad4, middle domain {Human (Homo sapiens) [TaxId: 9606]}
veislcaditrtgkvkqrtwtwgpcgqgaillvncdrdldsedlqdmslmtlstktpkdf
ftnhtlvlhvarsemdkvrvfqatrkcsvvlgpkwpshylmvpggkhnmdfyvealafpd
tdfpglitltislldtsnlelpeavvfqdsvvfrv

Timeline for d3apma2:

• d3apma2 first appeared in SCOPe 2.04
  
• d3apma2 appears in SCOPe 2.07