SCOPe 2.06: Domain d2znpb1: 2znp B:206-475

Lineage for d2znpb1 (2znp B:206-475)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Peroxisome proliferator-activated receptor delta, PPAR-DELTA [48526] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [48527] (16 PDB entries)

8. Domain d2znpb1: 2znp B:206-475 [244961]
   Other proteins in same PDB: d2znpb2
   automated match to d3tkma_
   protein/DNA complex; complexed with b7g, k55

Details for d2znpb1

PDB Entry: 2znp, 3 Å

PDB Description: human ppar delta ligand binding domain in complex with a synthetic agonist tipp204

PDB Compounds: (B:) Peroxisome proliferator-activated receptor delta

SCOPe Domain Sequences for d2znpb1:

Sequence, based on SEQRES records:

>d2znpb1 a.123.1.1 (B:206-475) Peroxisome proliferator-activated receptor delta, PPAR-DELTA {Human (Homo sapiens) [TaxId: 9606]}
pqvadlkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlwqaekglvwk
qlvnglppykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvhea
ifamlasivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdla
lfiaaiilcgdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrql
vtehaqmmqrikktetetslhpllqeiykd

Sequence, based on observed residues (ATOM records):

>d2znpb1 a.123.1.1 (B:206-475) Peroxisome proliferator-activated receptor delta, PPAR-DELTA {Human (Homo sapiens) [TaxId: 9606]}
pqvadlkafskhiynaylknfnmtkkkarsiltghtapfvihdietlwqaekglvwlppy
keisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheaifamlasiv
nkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalfiaaiilc
gdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlvtehaqmmq
rikktetetslhpllqeiykd

Timeline for d2znpb1:

• d2znpb1 first appeared in SCOPe 2.04, called d2znpb_
  
• d2znpb1 was called d2znpb_ in SCOPe 2.05
  
• d2znpb1 appears in SCOPe 2.07
  
• d2znpb1 appears in the current release, SCOPe 2.08