Lineage for d2o0oc_ (2o0o C:)

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2048772Fold b.22: TNF-like [49841] (1 superfamily)
    sandwich, 10 strands in 2 sheets; jelly-roll
  4. 2048773Superfamily b.22.1: TNF-like [49842] (2 families) (S)
  5. 2049110Family b.22.1.0: automated matches [191519] (1 protein)
    not a true family
  6. 2049111Protein automated matches [190873] (4 species)
    not a true protein
  7. 2049112Species Human (Homo sapiens) [TaxId:9606] [188225] (28 PDB entries)
  8. 2049166Domain d2o0oc_: 2o0o C: [243260]
    automated match to d2re9a_
    complexed with mg

Details for d2o0oc_

PDB Entry: 2o0o (more details), 3 Å

PDB Description: crystal structure of tl1a
PDB Compounds: (C:) TNF superfamily ligand TL1A

SCOPe Domain Sequences for d2o0oc_:

Sequence, based on SEQRES records: (download)

>d2o0oc_ b.22.1.0 (C:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
gdkprahltvvrqtptqhfknqfpalhwehelglaftknrmnytnkfllipesgdyfiys
qvtfrgmtsecseirqagrpnkpdsitvvitkvtdsypeptqllmgtksvcevgsnwfqp
iylgamfslqegdklmvnvsdislvdytkedktffgafll

Sequence, based on observed residues (ATOM records): (download)

>d2o0oc_ b.22.1.0 (C:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
gdkprahltvvrqtptqhfknqfpalhwehelglaftknrmnytnkfllipesgdyfiys
qvtfrgmtsecpnkpdsitvvitkvtdsypeptqllmgtksvcevgsnwfqpiylgamfs
lqegdklmvnvsdislvdytkedktffgafll

SCOPe Domain Coordinates for d2o0oc_:

Click to download the PDB-style file with coordinates for d2o0oc_.
(The format of our PDB-style files is described here.)

Timeline for d2o0oc_: