Lineage for d2bzdb1 (2bzd B:47-402)

  1. Root: SCOPe 2.04
  2. 1510239Class b: All beta proteins [48724] (176 folds)
  3. 1553917Fold b.68: 6-bladed beta-propeller [50938] (11 superfamilies)
    consists of six 4-stranded beta-sheet motifs; meander
  4. 1553918Superfamily b.68.1: Sialidases [50939] (3 families) (S)
  5. 1553919Family b.68.1.1: Sialidases (neuraminidases) [50940] (10 proteins)
  6. 1554180Protein automated matches [193245] (14 species)
    not a true protein
  7. 1554266Species Micromonospora viridifaciens [TaxId:1881] [254941] (3 PDB entries)
  8. 1554269Domain d2bzdb1: 2bzd B:47-402 [241389]
    Other proteins in same PDB: d2bzda2, d2bzda3, d2bzdb2, d2bzdb3, d2bzdc2, d2bzdc3
    automated match to d1euta3
    complexed with gal, gol, na

Details for d2bzdb1

PDB Entry: 2bzd (more details), 2 Å

PDB Description: galactose recognition by the carbohydrate-binding module of a bacterial sialidase.
PDB Compounds: (B:) bacterial sialidase

SCOPe Domain Sequences for d2bzdb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2bzdb1 b.68.1.1 (B:47-402) automated matches {Micromonospora viridifaciens [TaxId: 1881]}
geplyteqdlavngregfpnyripaltvtpdgdllasydgrptgidapgpnsilqrrstd
ggrtwgeqqvvsagqttapikgfsdpsylvdretgtifnfhvysqrqgfagsrpgtdpad
pnvlhanvatstdggltwshrtitaditpdpgwrsrfaasgegiqlrygphagrliqqyt
iinaagafqavsvysddhgrtwrageavgvgmdanktvelsdgrvllnsrdsarsgyrkv
avstdgghsygpvtidrdlpdptnnasiirafpdapagsarakvllfsnaasqtsrsqgt
irmscddgqtwpvskvfqpgsmsystltalpdgtygllyepgtgiryanfnlawlg

SCOPe Domain Coordinates for d2bzdb1:

Click to download the PDB-style file with coordinates for d2bzdb1.
(The format of our PDB-style files is described here.)

Timeline for d2bzdb1: