SCOPe 2.04: Domain d2bc9a1: 2bc9 A:2-283

Lineage for d2bc9a1 (2bc9 A:2-283)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.8: G proteins [52592] (79 proteins)
   core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest

6. Protein automated matches [190047] (24 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [186768] (124 PDB entries)

8. Domain d2bc9a1: 2bc9 A:2-283 [241286]
   Other proteins in same PDB: d2bc9a2
   automated match to d2b8wa1
   complexed with gnp, mg

Details for d2bc9a1

PDB Entry: 2bc9, 2.8 Å

PDB Description: crystal-structure of the n-terminal large gtpase domain of human guanylate binding protein 1 (hgbp1) in complex with non-hydrolysable gtp analogue gppnhp

PDB Compounds: (A:) interferon-induced guanylate-binding protein 1

SCOPe Domain Sequences for d2bc9a1:

Sequence, based on SEQRES records:

>d2bc9a1 c.37.1.8 (A:2-283) automated matches {Human (Homo sapiens) [TaxId: 9606]}
aseihmtgpmclientngrlmanpealkilsaitqpmvvvaivglyrtgksylmnklagk
kkgfslgstvqshtkgiwmwcvphpkkpghilvlldteglgdvekgdnqndswifalavl
lsstfvynsigtinqqamdqlyyvtelthrirsksspdenenevedsadfvsffpdfvwt
lrdfsldleadgqpltpdeyltyslklkkgtsqkdetfnlprlcirkffpkkkcfvfdrp
vhrrklaqleklqdeeldpefvqqvadfcsyifsnsktktls

Sequence, based on observed residues (ATOM records):

>d2bc9a1 c.37.1.8 (A:2-283) automated matches {Human (Homo sapiens) [TaxId: 9606]}
aseihmtgpmclientngrlmanpealkilsaitqpmvvvaivglyrtgksylmnklagk
kkgfslgstvqshtkgiwmwcvphpkkpghilvlldteglgdvekgdnqndswifalavl
lsstfvynsigtinqqamdqlyyvtelthrirsksdfvsffpdfvwtlrdfsldleadgq
pltpdeyltyslklkkgtsqkdetfnlprlcirkffpkkkcfvfdrpvhrrklaqleklq
deeldpefvqqvadfcsyifsnsktktls

Timeline for d2bc9a1:

• d2bc9a1 is new in SCOPe 2.04-stable
  
• d2bc9a1 appears in SCOPe 2.05
  
• d2bc9a1 appears in the current release, SCOPe 2.08