Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily) 3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465 |
Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules |
Family c.36.1.0: automated matches [227300] (1 protein) not a true family |
Protein automated matches [227126] (21 species) not a true protein |
Species Lactobacillus plantarum [TaxId:1590] [254973] (7 PDB entries) |
Domain d1y9db1: 1y9d B:9-182 [240985] Other proteins in same PDB: d1y9da2, d1y9db2, d1y9dc2, d1y9dd2 automated match to d2ez9a2 complexed with fad, mg, na, so4, tpp |
PDB Entry: 1y9d (more details), 2.2 Å
SCOPe Domain Sequences for d1y9db1:
Sequence, based on SEQRES records: (download)
>d1y9db1 c.36.1.0 (B:9-182) automated matches {Lactobacillus plantarum [TaxId: 1590]} tnilagaavikvleawgvdhlygipggsinsimdalsaerdrihyiqvrheevgamaaaa dakltgkigvcfgsagpggthlmnglydaredhvpvlaligqfgttgmnmdtfqemnenp iyadvadynvtavnaatlphvideairrayahqgvavvqipvdlpwqqipaedw
>d1y9db1 c.36.1.0 (B:9-182) automated matches {Lactobacillus plantarum [TaxId: 1590]} tnilagaavikvleawgvdhlygipggsinsimdalsaerdrihyiqvrheevgamaaaa dakltgkigvcfgsagpggthlmnglydaredhvpvlaligqfgttgmqemnenpiyadv adynvtavnaatlphvideairrayahqgvavvqipvdlpwqqipaedw
Timeline for d1y9db1: