SCOPe 2.05: Domain d3nzjf_: 3nzj F:

Lineage for d3nzjf_ (3nzj F:)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.0: automated matches [191393] (1 protein)
   not a true family

6. Protein automated matches [190509] (10 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [226129] (12 PDB entries)

8. Domain d3nzjf_: 3nzj F: [239517]
   Other proteins in same PDB: d3nzj1_, d3nzj2_, d3nzja_, d3nzjb_, d3nzjc_, d3nzjd_, d3nzje_, d3nzjg_, d3nzjh_, d3nzji_, d3nzjj_, d3nzjk_, d3nzjl_, d3nzjm_, d3nzjn_, d3nzjo_, d3nzjp_, d3nzjq_, d3nzjr_, d3nzjs_, d3nzju_, d3nzjv_, d3nzjw_, d3nzjx_, d3nzjy_, d3nzjz_
   automated match to d1irug_
   complexed with mes

Details for d3nzjf_

PDB Entry: 3nzj, 2.4 Å

PDB Description: Crystal structure of yeast 20S proteasome in complex with ligand 2a

PDB Compounds: (F:) Proteasome component C1

SCOPe Domain Sequences for d3nzjf_:

Sequence; same for both SEQRES and ATOM records:

>d3nzjf_ d.153.1.0 (F:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
gtgydlsnsvfspdgrnfqveyavkavengttsigikcndgvvfaveklitskllvpqkn
vkiqvvdrhigcvysglipdgrhlvnrgreeaasfkklyktpipipafadrlgqyvqaht
lynsvrpfgvstifggvdkngahlymlepsgsywgykgaatgkgrqsakaeleklvdhhp
eglsareavkqaakiiylahednkekdfeleiswcslsetnglhkfvkgdllqeaidfaq
kein

Timeline for d3nzjf_:

• d3nzjf_ first appeared in SCOPe 2.04
  
• d3nzjf_ appears in SCOPe 2.06
  
• d3nzjf_ appears in the current release, SCOPe 2.08