SCOPe 2.06: Domain d3gbmb1: 3gbm B:1-174

Lineage for d3gbmb1 (3gbm B:1-174)

1. Root: SCOPe 2.06

2. Class h: Coiled coil proteins [57942] (7 folds)

3. Fold h.3: Stalk segment of viral fusion proteins [58063] (3 superfamilies)
   core: trimeric coiled coil

4. Superfamily h.3.1: Influenza hemagglutinin (stalk) [58064] (2 families)

5. Family h.3.1.1: Influenza hemagglutinin (stalk) [58065] (2 proteins)

6. Protein Influenza hemagglutinin (stalk) [58066] (12 species)
   trimer

7. Species Influenza A virus, different strains [TaxId:11320] [58067] (127 PDB entries)

8. Domain d3gbmb1: 3gbm B:1-174 [239293]
   Other proteins in same PDB: d3gbma1, d3gbma2, d3gbmb2, d3gbmc1, d3gbmc2, d3gbml1, d3gbml2, d3gbmm1, d3gbmm2
   automated match to d4n5zb_
   complexed with bma, edo, gol, nag

Details for d3gbmb1

PDB Entry: 3gbm, 2.7 Å

PDB Description: crystal structure of fab cr6261 in complex with a h5n1 influenza virus hemagglutinin.

PDB Compounds: (B:) Hemagglutinin

SCOPe Domain Sequences for d3gbmb1:

Sequence; same for both SEQRES and ATOM records:

>d3gbmb1 h.3.1.1 (B:1-174) Influenza hemagglutinin (stalk) {Influenza A virus, different strains [TaxId: 11320]}
glfgaiagfieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmn
tqfeavgrefnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlyd
kvrlqlrdnakelgngcfefyhkcdnecmesvrngtydypqyseearlkreeis

Timeline for d3gbmb1:

• d3gbmb1 first appeared in SCOPe 2.04, called d3gbmb_
  
• d3gbmb1 was called d3gbmb_ in SCOPe 2.05
  
• d3gbmb1 appears in SCOPe 2.07
  
• d3gbmb1 appears in the current release, SCOPe 2.08