SCOPe 2.08: Domain d3dbri1: 3dbr I:99-176

Lineage for d3dbri1 (3dbr I:99-176)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Nedd8 [54244] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54245] (16 PDB entries)
   Uniprot Q15843

8. Domain d3dbri1: 3dbr I:99-176 [239206]
   Other proteins in same PDB: d3dbra_, d3dbrb1, d3dbrb2, d3dbrc_, d3dbrd1, d3dbrd2, d3dbre_, d3dbrf1, d3dbrf2, d3dbrg_, d3dbrh1, d3dbrh2, d3dbri2, d3dbrj2, d3dbrk2, d3dbrl2
   automated match to d3dbhj_
   complexed with zn

Details for d3dbri1

PDB Entry: 3dbr, 3.05 Å

PDB Description: structural dissection of a gating mechanism preventing misactivation of ubiquitin by nedd8's e1 (appbp1-uba3arg190gln-nedd8ala72arg)

PDB Compounds: (I:) nedd8

SCOPe Domain Sequences for d3dbri1:

Sequence; same for both SEQRES and ATOM records:

>d3dbri1 d.15.1.1 (I:99-176) Nedd8 {Human (Homo sapiens) [TaxId: 9606]}
gsmlikvktltgkeieidieptdkverikerveekegippqqqrliysgkqmndektaad
ykilggsvlhlvlrlrgg

Timeline for d3dbri1:

• d3dbri1 first appeared in SCOPe 2.04, called d3dbri_
  
• d3dbri1 appears in SCOPe 2.07