SCOPe 2.06: Domain d2yc4d_: 2yc4 D:

Lineage for d2yc4d_ (2yc4 D:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.0: automated matches [191323] (1 protein)
   not a true family

6. Protein automated matches [190123] (130 species)
   not a true protein

7. Species Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [255698] (6 PDB entries)

8. Domain d2yc4d_: 2yc4 D: [239035]
   Other proteins in same PDB: d2yc4a_, d2yc4b_
   automated match to d3tw8d_
   complexed with ca, cl, mg

Details for d2yc4d_

PDB Entry: 2yc4, 2.8 Å

PDB Description: intraflagellar transport complex 25-27 from chlamydomonas

PDB Compounds: (D:) small rab-related gtpase

SCOPe Domain Sequences for d2yc4d_:

Sequence, based on SEQRES records:

>d2yc4d_ c.37.1.0 (D:) automated matches {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]}
piditatlrckvavvgeatvgksalismftskgskflkdyamtsgvevvvapvtipdttv
svelflldtagsdlykeqisqywngvyyailvfdvssmesfesckawfellksarpdrer
plravlvanktdlppqrhqvrldmaqdwattntldffdvsanppgkdadapflsiattfy
rnyedkvaafqdacrn

Sequence, based on observed residues (ATOM records):

>d2yc4d_ c.37.1.0 (D:) automated matches {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]}
piditatlrckvavvgeatvgksalismftskgsvapvtipdttvsvelflldtsdlyke
qisqywngvyyailvfdvssmesfesckawfellksarpdrerplravlvanktdlpqvr
ldmaqdwattntldffdvsanppgkdadapflsiattfyrnyedkvaafqdacrn

Timeline for d2yc4d_:

• d2yc4d_ first appeared in SCOPe 2.04
  
• d2yc4d_ appears in SCOPe 2.05
  
• d2yc4d_ appears in SCOPe 2.07
  
• d2yc4d_ appears in the current release, SCOPe 2.08