Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2575216Class f: Membrane and cell surface proteins and peptides [56835] (60 folds)
  3. 2575768Fold f.4: Transmembrane beta-barrels [56924] (7 superfamilies)
    not a true fold, gathers together transmembrane barrels of different (n,S)
  4. 2575889Superfamily f.4.3: Porins [56935] (5 families) (S)
  5. 2576049Family f.4.3.3: Ligand-gated protein channel [56948] (5 proteins)
    monomeric (22,24) barrel; ~150 N-terminal residues form a "plug" or "cork" subdomain
  6. 2576088Protein automated matches [238352] (2 species)
    not a true protein

Species:

  1. 2576089Escherichia coli [TaxId:511145] [238353] (1 PDB entry)
  2. 3046501Pseudomonas aeruginosa [TaxId:208964] [346563] (9 PDB entries)
    1. Domain for 5m9b:
    2. Domain for 5mzs:
    3. Domain for 5nc3:
    4. Domain for 5nc4:
    5. Domain for 5nr2:
    6. Domain for 5out:
    7. Domain for 6i2j:
    8. Domain for 6q5e:
    9. Domain for 6r1f:

More info for Protein automated matches from f.4.3.3: Ligand-gated protein channel

Timeline for Protein automated matches from f.4.3.3: Ligand-gated protein channel: