SCOPe 2.03: Domain d4jbra_: 4jbr A:

Lineage for d4jbra_ (4jbr A:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family)

5. Family c.1.20.1: tRNA-guanine transglycosylase [51714] (3 proteins)

6. Protein Queosine tRNA-guanine transglycosylase [51715] (3 species)
   contains zinc-binding subdomain

7. Species Zymomonas mobilis [TaxId:542] [51716] (57 PDB entries)
   Uniprot P28720

8. Domain d4jbra_: 4jbr A: [237818]
   automated match to d4htba_
   complexed with dms, zn; mutant

Details for d4jbra_

PDB Entry: 4jbr, 2.92 Å

PDB Description: trna-guanine transglycosylase y330c mutant as covalently linked dimer in space group p6(5)22

PDB Compounds: (A:) tRNA-guanine transglycosylase

SCOPe Domain Sequences for d4jbra_:

Sequence, based on SEQRES records:

>d4jbra_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshldg
srhmlspersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrk
eqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpm
lpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsed
lkpldsechcavcqkwsracihhlirageilgamlmtehniafyqqlmqkirdsisegrf
sqfaqdfraryfarn

Sequence, based on observed residues (ATOM records):

>d4jbra_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslsltkqseegvtfkshldgs
rhmlspersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrke
qaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpml
pddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsedl
kpldsechcavcqkwsracihhlirageilgamlmtehniafyqqlmqkirdsisegrfs
qfaqdfraryfarn

Timeline for d4jbra_:

• d4jbra_ is new in SCOPe 2.03-stable
  
• d4jbra_ appears in SCOPe 2.04
  
• d4jbra_ appears in the current release, SCOPe 2.08