SCOPe 2.05: Domain d4m6ua2: 4m6u A:133-359

Lineage for d4m6ua2 (4m6u A:133-359)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families)
   binds metal ion (magnesium or manganese) in conserved site inside barrel
   N-terminal alpha+beta domain is common to this superfamily

5. Family c.1.11.2: D-glucarate dehydratase-like [51609] (15 proteins)

6. Protein automated matches [226997] (11 species)
   not a true protein

7. Species Pseudomonas putida [TaxId:303] [228631] (6 PDB entries)

8. Domain d4m6ua2: 4m6u A:133-359 [237297]
   Other proteins in same PDB: d4m6ua1, d4m6ub1
   automated match to d3uxkd2
   complexed with mg, ttn

Details for d4m6ua2

PDB Entry: 4m6u, 1.8 Å

PDB Description: p. putida mandelate racemase co-crystallized with tartronic acid

PDB Compounds: (A:) mandelate racemase

SCOPe Domain Sequences for d4m6ua2:

Sequence; same for both SEQRES and ATOM records:

>d4m6ua2 c.1.11.2 (A:133-359) automated matches {Pseudomonas putida [TaxId: 303]}
pvqaydshsldgvklateravtaaelgfravktkigypaldqdlavvrsirqavgddfgi
mvdynqsldvpaaikrsqalqqegvtwieeptlqhdyeghqriqsklnvpvqmgenwlgp
eemfkalsigacrlampdamkiggvtgwirasalaqqfgipmsshlfqeisahllaatpt
ahwlerldlagsvieptltfeggnavipdlpgvgiiwrekeigkylv

Timeline for d4m6ua2:

• d4m6ua2 first appeared in SCOPe 2.03
  
• d4m6ua2 appears in SCOPe 2.04
  
• d4m6ua2 appears in SCOPe 2.06
  
• d4m6ua2 appears in the current release, SCOPe 2.08