SCOPe 2.03: Domain d4lifa_: 4lif A:

Lineage for d4lifa_ (4lif A:)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.89: Origin of replication-binding domain, RBD-like [55463] (1 superfamily)
   alpha-beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel sheet 41325

4. Superfamily d.89.1: Origin of replication-binding domain, RBD-like [55464] (6 families)

5. Family d.89.1.1: The origin DNA-binding domain of SV40 T-antigen [55465] (2 proteins)

6. Protein The origin DNA-binding domain of SV40 T-antigen [55466] (2 species)

7. Species Jc polyomavirus [TaxId:10632] [237285] (3 PDB entries)

8. Domain d4lifa_: 4lif A: [237286]
   automated match to d1tbda_
   complexed with so4

Details for d4lifa_

PDB Entry: 4lif, 2.6 Å

PDB Description: Crystal structure of the JCV large T-antigen origin binding domain

PDB Compounds: (A:) large t antigen

SCOPe Domain Sequences for d4lifa_:

Sequence; same for both SEQRES and ATOM records:

>d4lifa_ d.89.1.1 (A:) The origin DNA-binding domain of SV40 T-antigen {Jc polyomavirus [TaxId: 10632]}
vedpkdfpvdlhaflsqavfsnrtvasfavyttkekaqilykklmekysvtfisrhgfgg
hnilffltphrhrvsainnycqklctfsflickgvnkeylfysalcrqpyavveesiqgg
lkehdfn

Timeline for d4lifa_:

• d4lifa_ is new in SCOPe 2.03-stable
  
• d4lifa_ appears in SCOPe 2.04
  
• d4lifa_ appears in the current release, SCOPe 2.08