Lineage for d4me6a1 (4me6 A:2-139)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2444095Fold c.30: PreATP-grasp domain [52439] (1 superfamily)
    3 layers: a/b/a; parallel or mixed beta-sheet of 4 to 6 strands
    possible rudiment form of Rossmann-fold domain
  4. 2444096Superfamily c.30.1: PreATP-grasp domain [52440] (10 families) (S)
    precedes the ATP-grasp domain common to all superfamily members, can contain a substrate-binding function
  5. 2444442Family c.30.1.0: automated matches [227183] (1 protein)
    not a true family
  6. 2444443Protein automated matches [226903] (38 species)
    not a true protein
  7. 2444600Species Xanthomonas oryzae [TaxId:342109] [225704] (4 PDB entries)
  8. 2444603Domain d4me6a1: 4me6 A:2-139 [237066]
    Other proteins in same PDB: d4me6a2
    automated match to d3e5na1
    complexed with adp, mg

Details for d4me6a1

PDB Entry: 4me6 (more details), 2.1 Å

PDB Description: Crystal structure of D-alanine-D-alanine ligase A from Xanthomonas oryzae pathovar oryzae with ADP
PDB Compounds: (A:) d-alanine--d-alanine ligase

SCOPe Domain Sequences for d4me6a1:

Sequence, based on SEQRES records: (download)

>d4me6a1 c.30.1.0 (A:2-139) automated matches {Xanthomonas oryzae [TaxId: 342109]}

Sequence, based on observed residues (ATOM records): (download)

>d4me6a1 c.30.1.0 (A:2-139) automated matches {Xanthomonas oryzae [TaxId: 342109]}

SCOPe Domain Coordinates for d4me6a1:

Click to download the PDB-style file with coordinates for d4me6a1.
(The format of our PDB-style files is described here.)

Timeline for d4me6a1:

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