SCOPe 2.04: Domain d3zl6b_: 3zl6 B:

Lineage for d3zl6b_ (3zl6 B:)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.0: automated matches [196408] (1 protein)
   not a true family

6. Protein automated matches [196409] (27 species)
   not a true protein

7. Species Pseudomonas aeruginosa [TaxId:208964] [229469] (5 PDB entries)

8. Domain d3zl6b_: 3zl6 B: [236956]
   automated match to d3zcda_
   complexed with dms, mg, nvu

Details for d3zl6b_

PDB Entry: 3zl6, 1.85 Å

PDB Description: native structure of farnesyl pyrophosphate synthase from pseudomonas aeruginosa pao1, with bound fragment km10833.

PDB Compounds: (B:) Geranyltranstransferase

SCOPe Domain Sequences for d3zl6b_:

Sequence, based on SEQRES records:

>d3zl6b_ a.128.1.0 (B:) automated matches {Pseudomonas aeruginosa [TaxId: 208964]}
smiaayqarcqarvdaaldalfvapreelqrlyeamrysvmnggkrvrpllayaacealg
gapqradaaacavelihayslvhddlpamddddlrrgqptthrafdeatailaadglqal
afevladtrrnpqehavclemltrlaraagsagmvggqaidlgsvgvaldqaalevmhrh
ktgalieasvrlgalasgraepaslaaleryaeaiglafqvqddildvesdtatlgktqg
kdqahnkptypallgleaakgyalelrdlalaaldgfppsadplrqlaryive

Sequence, based on observed residues (ATOM records):

>d3zl6b_ a.128.1.0 (B:) automated matches {Pseudomonas aeruginosa [TaxId: 208964]}
smiaayqarcqarvdaaldalfvapreelqrlyeamrysvmnggkrvrpllayaacealg
gapqradaaacavelihayslvhddlpamddddlrrgqptthrafdeatailaadglqal
afevladtrrnpqehavclemltrlaraagsagmvggqaidlgsvgvaldqaalevmhrh
ktgalieasvrlgalasgraepaslaaleryaeaiglafqvqddildvptypallgleaa
kgyalelrdlalaaldgfppsadplrqlaryive

Timeline for d3zl6b_:

• d3zl6b_ first appeared in SCOPe 2.03
  
• d3zl6b_ appears in SCOPe 2.05
  
• d3zl6b_ appears in the current release, SCOPe 2.08, called d3zl6b1