SCOPe 2.03: Domain d4nnwa_: 4nnw A:

Lineage for d4nnwa_ (4nnw A:)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.4: Proteasome subunits [56251] (4 proteins)

6. Protein Proteasome beta subunit (catalytic) [56252] (5 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56254] (50 PDB entries)
   The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)

8. Domain d4nnwa_: 4nnw A: [236839]
   Other proteins in same PDB: d4nnwb_, d4nnwc_, d4nnwd_, d4nnwe_, d4nnwg_, d4nnwh_, d4nnwp_, d4nnwq_, d4nnwr_, d4nnws_, d4nnwu_, d4nnwv_
   automated match to d1jd2v_
   complexed with 2mk, mg

Details for d4nnwa_

PDB Entry: 4nnw, 2.6 Å

PDB Description: yCP in complex with Z-Leu-Leu-Leu-ketoaldehyde

PDB Compounds: (A:) Proteasome subunit alpha type-2

SCOPe Domain Sequences for d4nnwa_:

Sequence; same for both SEQRES and ATOM records:

>d4nnwa_ d.153.1.4 (A:) Proteasome beta subunit (catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
mtdrysfslttfspsgklgqidyaltavkqgvtslgikatngvviatekksssplamset
lskvslltpdigavysgmgpdyrvlvdksrkvahtsykriygeypptkllvsevakimqe
atqsggvrpfgvslliaghdefngfslyqvdpsgsyfpwkataigkgsvaaktflekrwn
deleledaihialltlkesvegefngdtielaiigdenpdllgytgiptdkgprfrklts
qeindrleal

Timeline for d4nnwa_:

• d4nnwa_ is new in SCOPe 2.03-stable
  
• d4nnwa_ appears in SCOPe 2.04
  
• d4nnwa_ appears in the current release, SCOPe 2.08