Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2516578Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2516579Superfamily d.58.1: 4Fe-4S ferredoxins [54862] (7 families) (S)
  5. 2516604Family d.58.1.2: 7-Fe ferredoxin [54870] (3 proteins)
    has C-terminal extension to the common fold
  6. 2516658Protein automated matches [236563] (6 species)
    not a true protein

Species:

  1. 2516659Pea (Pisum sativum) [TaxId:3888] [276244] (8 PDB entries)
    1. Domain for 4rku:
    2. Domain for 4xk8:
    3. Domain for 4y28:
    4. Domain for 5l8r:
    5. Domain for 6yac:
    6. Domain for 6yez:
    7. Domain for 6zoo:
    8. Domain for 7dkz:
  2. 2516664Synechocystis sp. [TaxId:1148] [236568] (1 PDB entry)
  3. 3047504Synechocystis sp. [TaxId:1111708] [347566] (2 PDB entries)
    1. Domains for 5oy0:
      1. 3047505Domain d5oy0c_: 5oy0 c: [347567]
        Other proteins in same PDB: d5oy00_, d5oy01_, d5oy02_, d5oy04_, d5oy05_, d5oy06_, d5oy07_, d5oy08_, d5oy0a_, d5oy0b_, d5oy0d_, d5oy0e_, d5oy0f_, d5oy0h_, d5oy0i_, d5oy0j_, d5oy0k_, d5oy0l_
        automated match to d4kt0c_
        complexed with 45d, act, bcr, c7z, ca, cl, cla, dgd, ech, eq3, lhg, lmg, lmt, mg, pqn, sf4, sqd
      2. 3047873Domain d5oy03_: 5oy0 3: [347935]
        Other proteins in same PDB: d5oy00_, d5oy01_, d5oy02_, d5oy04_, d5oy05_, d5oy06_, d5oy07_, d5oy08_, d5oy0a_, d5oy0b_, d5oy0d_, d5oy0e_, d5oy0f_, d5oy0h_, d5oy0i_, d5oy0j_, d5oy0k_, d5oy0l_
        automated match to d4kt0c_
        complexed with 45d, act, bcr, c7z, ca, cl, cla, dgd, ech, eq3, lhg, lmg, lmt, mg, pqn, sf4, sqd
    2. Domains for 6uzv:
      1. 3092449Domain d6uzvc_: 6uzv c: [392511]
        Other proteins in same PDB: d6uzv0_, d6uzv1_, d6uzv2_, d6uzv4_, d6uzv5_, d6uzv6_, d6uzv7_, d6uzva_, d6uzvb_, d6uzvd_, d6uzve_, d6uzvf_, d6uzvh_, d6uzvi_, d6uzvj_, d6uzvl_
        automated match to d5oy0c_
        complexed with bcr, ca, cl0, cla, lhg, lmg, lmt, pqn, sf4
      2. 3092477Domain d6uzv3_: 6uzv 3: [392539]
        Other proteins in same PDB: d6uzv0_, d6uzv1_, d6uzv2_, d6uzv4_, d6uzv5_, d6uzv6_, d6uzv7_, d6uzva_, d6uzvb_, d6uzvd_, d6uzve_, d6uzvf_, d6uzvh_, d6uzvi_, d6uzvj_, d6uzvl_
        automated match to d5oy0c_
        complexed with bcr, ca, cl0, cla, lhg, lmg, lmt, pqn, sf4
  4. 3070384Chlamydomonas reinhardtii [TaxId:3055] [370446] (4 PDB entries)
    1. Domain for 6jo5:
    2. Domain for 6jo6:
    3. Domain for 7dz7:
    4. Domain for 7dz8:
  5. 3075474Nostoc sp. [TaxId:103690] [375536] (1 PDB entry)
  6. 3090977Chaetoceros gracilis [TaxId:184592] [391039] (1 PDB entry)

More info for Protein automated matches from d.58.1.2: 7-Fe ferredoxin

Timeline for Protein automated matches from d.58.1.2: 7-Fe ferredoxin: