SCOPe 2.06: Domain d4ksha1: 4ksh A:18-224

Lineage for d4ksha1 (4ksh A:18-224)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.122: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase [55873] (1 superfamily)
   8-stranded mixed beta-sheet; 2 layers: alpha/beta

4. Superfamily d.122.1: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase [55874] (5 families)

5. Family d.122.1.0: automated matches [227160] (1 protein)
   not a true family

6. Protein automated matches [226867] (14 species)
   not a true protein

7. Species Enterococcus faecalis [TaxId:226185] [226590] (9 PDB entries)

8. Domain d4ksha1: 4ksh A:18-224 [236039]
   Other proteins in same PDB: d4ksha2
   automated match to d4geea_
   protein/DNA complex; complexed with gol, htt

Details for d4ksha1

PDB Entry: 4ksh, 1.7 Å

PDB Description: dna gyrase atp binding domain of enterococcus faecalis in complex with a small molecule inhibitor (7-({4-[(3r)-3-aminopyrrolidin-1-yl]-5-chloro-6-ethyl-7h-pyrrolo[2,3-d]pyrimidin-2-yl}sulfanyl)-1,5-naphthyridin-1(4h)-ol)

PDB Compounds: (A:) DNA gyrase subunit b

SCOPe Domain Sequences for d4ksha1:

Sequence, based on SEQRES records:

>d4ksha1 d.122.1.0 (A:18-224) automated matches {Enterococcus faecalis [TaxId: 226185]}
gleavrkrpgmyigstsgeglhhlvweivdnsidealagfaksiqviiepddsitviddg
rgipvgiqaktgrpavetvftvlhaggkfggggykvsgglhgvgssvvnalstsldvrvy
kdgkvyyqeyrrgavvddlkvieetdrhgttvhfipdpeiftettvydfdklatrvrela
flnrglhisiedrregqedkkeyhyeg

Sequence, based on observed residues (ATOM records):

>d4ksha1 d.122.1.0 (A:18-224) automated matches {Enterococcus faecalis [TaxId: 226185]}
gleavrkrpgmyigstsgeglhhlvweivdnsidealagfaksiqviiepddsitviddg
rgipvgiqaktgrpavetvftvlhgvgssvvnalstsldvrvykdgkvyyqeyrrgavvd
dlkvieetdrhgttvhfipdpeiftettvydfdklatrvrelaflnrglhisiedrregq
edkkeyhyeg

Timeline for d4ksha1:

• d4ksha1 first appeared in SCOPe 2.03, called d4ksha_
  
• d4ksha1 was called d4ksha_ in SCOPe 2.05
  
• d4ksha1 appears in SCOPe 2.07
  
• d4ksha1 appears in the current release, SCOPe 2.08